C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEK oncogene (DNA binding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021377 Dek 10090 - 13:47084775-47106201 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021807 Dek-001 47084782-47106190 protein_coding
  ENSMUST00000129352 Dek-006 47098155-47105830 protein_coding
  ENSMUST00000135278 Dek-002 47088595-47106201 protein_coding
  ENSMUST00000138401 Dek-003 47084775-47098438 processed_transcript
  ENSMUST00000143933 Dek-005 47101487-47106154 processed_transcript
  ENSMUST00000150652 Dek-004 47105381-47106183 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021807ENSMUST00000129352ENSMUST00000135278ENSMUST00000138401ENSMUST00000143933ENSMUST00000150652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021807 1.417±0.63 N/A 23.149±3.61 17.429±1.42 3.332±1.63 3.530±1.15 1.061±0.48 2.697±0.39 58.895±65.03 4.818±1.68 4.950±2.28 7.070±6.34 24.501±8.95 2.099±0.99
ENSMUST00000129352 N/A N/A N/A 16.393±0.00 N/A N/A N/A N/A N/A N/A N/A 22.145±19.09 26.095±8.65 25.398±0.00
ENSMUST00000135278 N/A 29.738±15.56 N/A N/A 13.686±0.94 10.592±3.61 N/A 4.270±0.76 4.608±1.96 6.881±2.11 N/A 25.564±13.83 N/A 1.858±0.45
ENSMUST00000138401 1.497±1.03 N/A N/A 6.403±2.20 3.855±0.85 3.150±0.27 1.041±0.31 3.494±0.20 11.034±9.83 3.189±0.47 N/A 10.365±4.75 10.085±6.33 1.894±1.23
ENSMUST00000143933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.243±0.00
ENSMUST00000150652 N/A 32.807±8.78 N/A N/A 4.222±0.00 8.238±1.74 N/A 4.519±0.86 1.829±0.19 7.911±3.27 N/A 4.385±0.55 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0008X6 CIL_0008X6_0002 VISTA 13:47010584-47612217
CIL_0003RV CIL_0003RV_0002 CGP 13:47043499-47106201
CIL_0007V4 CIL_0007V4_0002 VISTA 13:47067148-47669233
CIL_00041Y CIL_00041Y_0002 CGP 13:47084775-47247991

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0016568 IEA chromatin modification
GO:0042393 IEA histone binding
GO:0043292 IDA contractile fiber
GO:0044822 IEA poly(A) RNA binding
GO:2000779 IEA regulation of double-strand break repair
GO:2001032 IMP regulation of double-strand break repair via nonhomologous end joining

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070108 dek DEK oncogene protein_coding Danio_rerio
ENSG00000124795 DEK DEK proto-oncogene protein_coding Homo_sapiens

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