C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 17 open reading frame 53
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125319 C17orf53 9606 + 17:44141906-44162476 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245382 C17orf53-003 44142022-44162476 protein_coding
  ENST00000319977 C17orf53-002 44141906-44162476 protein_coding
  ENST00000585683 C17orf53-001 44141908-44162285 protein_coding
  ENST00000588073 C17orf53-005 44154360-44162004 retained_intron
  ENST00000588434 C17orf53-004 44147771-44152767 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245382ENST00000319977ENST00000585683ENST00000588073ENST00000588434
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245382 N/A 0.323±0.00 N/A 0.065±0.00 N/A N/A 0.051±0.02 N/A 0.141±0.00 N/A 0.424±0.00 N/A
ENST00000319977 N/A N/A 0.641±0.00 N/A 0.118±0.00 N/A N/A 0.031±0.00 N/A 0.146±0.00 0.563±0.48 4.144±0.00
ENST00000585683 0.335±0.00 N/A N/A 0.020±0.00 0.203±0.00 0.181±0.00 N/A N/A N/A 2.463±1.59 0.710±0.37 4.283±1.88
ENST00000588073 N/A 0.054±0.00 N/A 0.172±0.00 N/A N/A 0.153±0.00 N/A N/A 10.924±0.00 N/A 5.099±0.00
ENST00000588434 N/A N/A 0.087±0.00 N/A 0.049±0.02 N/A N/A 0.054±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0001 VISTA 17:43966083-44567774
CIL_0005J4 CIL_0005J4_0001 CGP 17:44076746-44162476
CIL_0005J3 CIL_0005J3_0001 CGP 17:44141906-44179083

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096229 C3H17orf53 chromosome 17 open reading frame 53 protein_coding Danio_rerio
ENSMUSG00000034773 BC030867 cDNA sequence BC030867 protein_coding Mus_musculus

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