C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125354 SEPT6 9606 - X:119615724-119693370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343984 SEPT6-001 119617639-119693370 protein_coding
  ENST00000354228 SEPT6-004 119616712-119693370 protein_coding
  ENST00000354416 SEPT6-002 119616945-119693370 protein_coding
  ENST00000360156 SEPT6-006 119615724-119693370 protein_coding
  ENST00000394610 SEPT6-201 119616948-119693370 protein_coding
  ENST00000460411 SEPT6-005 119616712-119693370 nonsense_mediated_decay
  ENST00000467310 SEPT6-007 119619309-119633424 processed_transcript
  ENST00000481072 SEPT6-008 119628816-119633502 processed_transcript
  ENST00000489216 SEPT6-003 119616716-119693370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343984ENST00000354228ENST00000354416ENST00000360156ENST00000394610ENST00000460411ENST00000467310ENST00000489216
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343984 1.187±0.00 N/A N/A N/A N/A N/A 0.642±0.28 1.825±1.07 1.246±0.00 0.916±0.00 0.256±0.16 0.289±0.00 2.347±0.00 N/A
ENST00000354228 N/A N/A 2.437±0.00 4.276±2.44 3.672±0.00 5.965±0.00 1.219±0.00 2.057±0.00 3.074±0.00 N/A N/A 3.610±1.33 9.459±5.51 20.123±0.00
ENST00000354416 N/A N/A N/A N/A 1.203±0.00 N/A N/A 0.234±0.00 0.453±0.07 1.582±0.00 N/A 0.911±0.11 1.309±0.00 N/A
ENST00000360156 2.032±0.00 6.922±0.00 N/A N/A 1.779±0.00 N/A N/A 1.356±0.95 1.134±0.05 3.557±0.00 N/A 1.531±0.10 2.249±0.62 8.085±0.74
ENST00000394610 N/A 7.821±0.00 N/A N/A 1.146±0.00 1.785±0.00 N/A 0.556±0.32 N/A N/A N/A 0.908±0.22 1.624±0.00 N/A
ENST00000460411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.704±0.00 N/A N/A N/A
ENST00000467310 N/A N/A N/A N/A N/A N/A 1.324±0.00 5.343±0.00 3.318±0.00 9.528±0.00 0.235±0.00 N/A 6.729±0.89 N/A
ENST00000489216 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.628±0.08 N/A N/A 3.972±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U3 CIL_0001U3_0001 CGP X:119588337-119693370
CIL_000177 CIL_000177_0002 CGP X:119615724-119760164

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000910 TAS cytokinesis
GO:0005515 IPI protein binding
GO:0005525 TAS:IEA GTP binding
GO:0007049 IEA cell cycle
GO:0008021 IEA synaptic vesicle
GO:0016032 IEA viral process
GO:0031105 IEA septin complex
GO:0043679 IEA axon terminus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010721 sept6 septin 6 protein_coding Danio_rerio
ENSMUSG00000050379 Sept6 septin 6 protein_coding Mus_musculus

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