C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050379 Sept6 10090 - X:36911326-36991794 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053456 Sept6-002 36913446-36989656 protein_coding
  ENSMUST00000060474 Sept6-003 36911326-36989656 protein_coding
  ENSMUST00000115239 Sept6-001 36915031-36989656 protein_coding
  ENSMUST00000128766 Sept6-004 36971902-36989491 retained_intron
  ENSMUST00000152291 Sept6-005 36966596-36991794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053456ENSMUST00000060474ENSMUST00000115239ENSMUST00000152291
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053456 1.697±0.69 1.185±0.22 1.791±0.71 2.495±0.30 6.271±1.88 1.494±0.27 0.589±0.33 0.631±0.38 0.984±0.80 1.446±0.64 0.145±0.04 1.616±0.57 3.379±1.66 2.731±0.80
ENSMUST00000060474 0.577±0.03 N/A 0.860±0.00 11.995±0.33 N/A 0.564±0.00 0.305±0.03 0.269±0.01 0.356±0.00 0.560±0.00 0.107±0.03 0.711±0.27 1.661±0.55 N/A
ENSMUST00000115239 1.797±0.29 1.231±0.56 2.561±0.00 16.839±11.86 N/A 1.611±0.26 0.909±0.19 0.792±0.30 1.341±0.75 1.638±0.30 0.273±0.15 4.769±3.71 11.991±11.86 4.370±0.68
ENSMUST00000152291 5.155±1.03 8.546±1.56 N/A N/A 25.055±4.01 8.017±1.04 N/A 2.378±0.94 0.708±0.22 4.695±1.01 N/A 8.145±1.70 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U3 CIL_0001U3_0002 CGP X:36887540-36991794
CIL_000177 CIL_000177_0003 CGP X:36911326-37050418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0007049 IEA cell cycle
GO:0008021 IDA synaptic vesicle
GO:0031105 IEA septin complex
GO:0043679 IDA axon terminus
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010721 sept6 septin 6 protein_coding Danio_rerio
ENSG00000125354 SEPT6 septin 6 protein_coding Homo_sapiens

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