C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460411 SEPT6-005 ENSG00000125354 9606 - X:119616712-119693370 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000460411
Transcript ID Muscle
ENST00000460411 0.704±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U3 CIL_0001U3_0001 CGP X:119588337-119693370
CIL_000177 CIL_000177_0002 CGP X:119615724-119760164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000910 TAS cytokinesis
GO:0005515 IPI protein binding
GO:0005525 TAS:IEA GTP binding
GO:0007049 IEA cell cycle
GO:0016032 IEA viral process
GO:0031105 IEA septin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060474 Sept6-003 protein_coding Mus_musculus 0 1345
ENSMUST00000053456 Sept6-002 protein_coding Mus_musculus 0 1345
ENSMUST00000115239 Sept6-001 protein_coding Mus_musculus 0 1345
ENSMUST00000152291 Sept6-005 protein_coding Mus_musculus 0 558
ENSMUST00000128766 Sept6-004 retained_intron Mus_musculus 0 353
ENSDART00000136442 sept6-002 protein_coding Danio_rerio 2e-36 158
ENSDART00000137997 sept6-001 protein_coding Danio_rerio 2e-36 158
ENSDART00000139615 sept6-003 processed_transcript Danio_rerio 1e-33 148
ENSDART00000135700 sept6-004 processed_transcript Danio_rerio 1e-32 145

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