C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5', 3'-nucleotidase, cytosolic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125458 NT5C 9606 - 17:75130225-75131795 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000245552 NT5C-001 75130228-75131795 protein_coding
  ENST00000577523 NT5C-012 75130363-75131425 retained_intron
  ENST00000578095 NT5C-016 75130571-75131757 retained_intron
  ENST00000578337 NT5C-009 75130568-75131321 protein_coding
  ENST00000578407 NT5C-014 75130230-75131683 protein_coding
  ENST00000579023 NT5C-006 75130546-75131730 retained_intron
  ENST00000579082 NT5C-007 75130788-75131714 processed_transcript
  ENST00000580423 NT5C-010 75130332-75131258 protein_coding
  ENST00000580758 NT5C-003 75130228-75131743 nonsense_mediated_decay
  ENST00000582160 NT5C-013 75130225-75131446 protein_coding
  ENST00000582170 NT5C-015 75130473-75131744 protein_coding
  ENST00000582744 NT5C-008 75130271-75131473 nonsense_mediated_decay
  ENST00000583655 NT5C-002 75130228-75131749 retained_intron
  ENST00000584352 NT5C-011 75130436-75131048 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245552ENST00000577523ENST00000578337ENST00000578407ENST00000580423ENST00000580758ENST00000582160ENST00000584352
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245552 18.790±0.00 28.352±0.00 N/A 6.824±3.98 16.713±0.00 11.299±4.19 3.358±2.10 26.991±0.00 8.652±0.00 19.605±0.00 9.934±3.60 39.856±14.24 27.050±4.27 16.139±3.27
ENST00000577523 N/A N/A 0.968±0.00 N/A N/A N/A N/A 5.359±0.00 1.630±0.00 N/A 1.157±0.00 4.691±0.00 N/A N/A
ENST00000578337 N/A N/A N/A N/A N/A N/A N/A N/A 1.020±0.00 N/A N/A N/A N/A N/A
ENST00000578407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.777±0.00 N/A N/A
ENST00000580423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.453±0.00 N/A N/A
ENST00000580758 N/A N/A N/A N/A N/A 2.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582160 N/A N/A 1.265±0.00 N/A 1.553±0.00 N/A N/A N/A 1.858±0.00 0.976±0.00 N/A 2.093±0.00 N/A N/A
ENST00000584352 N/A N/A 1.119±0.00 N/A 1.258±0.00 N/A N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_00008L CIL_00008L_0001 CGP 17:75087727-75130265
CIL_0001FZ CIL_0001FZ_0001 CGP 17:75109952-75131795
CIL_0001JI CIL_0001JI_0001 CGP 17:75130225-75168281

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006144 TAS purine nucleobase metabolic process
GO:0006195 TAS purine nucleotide catabolic process
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0008252 IDA nucleotidase activity
GO:0008253 EXP:IEA 5'-nucleotidase activity
GO:0009223 IDA pyrimidine deoxyribonucleotide catabolic process
GO:0009264 IEA deoxyribonucleotide catabolic process
GO:0016311 IEA:IDA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0019103 IDA pyrimidine nucleotide binding
GO:0044281 TAS small molecule metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000020736 Nt5c 5',3'-nucleotidase, cytosolic protein_coding Mus_musculus

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