C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5',3'-nucleotidase, cytosolic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020736 Nt5c 10090 - 11:115490420-115491862 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021082 Nt5c-001 115490420-115491862 protein_coding
  ENSMUST00000106530 Nt5c-003 115490420-115491815 protein_coding
  ENSMUST00000124778 Nt5c-002 115490638-115491851 retained_intron
  ENSMUST00000125940 Nt5c-004 115490700-115491202 retained_intron
  ENSMUST00000130668 Nt5c-005 115490771-115491371 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021082ENSMUST00000124778ENSMUST00000125940ENSMUST00000130668
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021082 26.271±1.73 33.712±6.06 29.437±1.47 22.640±5.22 19.868±7.52 54.055±3.46 3.806±0.67 20.086±0.59 18.137±6.12 22.379±0.78 3.783±1.14 34.511±8.41 13.084±4.04 12.280±3.81
ENSMUST00000124778 N/A N/A 5.681±0.92 6.509±0.44 N/A N/A 1.308±0.00 N/A 4.887±0.18 N/A N/A N/A 2.331±0.00 N/A
ENSMUST00000125940 N/A N/A N/A N/A 12.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130668 N/A N/A N/A 35.755±0.00 N/A N/A N/A N/A N/A N/A N/A 68.997±0.00 17.581±3.02 39.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_00008L CIL_00008L_0002 CGP 11:115462474-115490467
CIL_0001FZ CIL_0001FZ_0002 CGP 11:115475667-115491862
CIL_0001JI CIL_0001JI_0002 CGP 11:115490420-115514387

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0008252 IEA nucleotidase activity
GO:0008253 IDA 5'-nucleotidase activity
GO:0009223 IEA pyrimidine deoxyribonucleotide catabolic process
GO:0009264 IDA deoxyribonucleotide catabolic process
GO:0016311 IEA dephosphorylation
GO:0016791 IDA phosphatase activity
GO:0019103 IEA pyrimidine nucleotide binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125458 NT5C 5', 3'-nucleotidase, cytosolic protein_coding Homo_sapiens

Loading