C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5', 3'-nucleotidase, cytosolic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580758 NT5C-003 ENSG00000125458 9606 - 17:75130228-75131743 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000580758
Transcript ID Colon
ENST00000580758 2.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_00008L CIL_00008L_0001 CGP 17:75087727-75130265
CIL_0001FZ CIL_0001FZ_0001 CGP 17:75109952-75131795
CIL_0001JI CIL_0001JI_0001 CGP 17:75130225-75168281

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006144 TAS purine nucleobase metabolic process
GO:0006195 TAS purine nucleotide catabolic process
GO:0006206 TAS pyrimidine nucleobase metabolic process
GO:0008252 IDA nucleotidase activity
GO:0008253 EXP:IEA 5'-nucleotidase activity
GO:0009223 IDA pyrimidine deoxyribonucleotide catabolic process
GO:0009264 IEA deoxyribonucleotide catabolic process
GO:0016311 IDA dephosphorylation
GO:0019103 IDA pyrimidine nucleotide binding
GO:0044281 TAS small molecule metabolic process
GO:0046135 TAS pyrimidine nucleoside catabolic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021082 Nt5c-001 protein_coding Mus_musculus 0 324
ENSMUST00000124778 Nt5c-002 retained_intron Mus_musculus 0 285
ENSMUST00000106530 Nt5c-003 protein_coding Mus_musculus 0 285
ENSMUST00000125940 Nt5c-004 retained_intron Mus_musculus 0 206

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