C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin leucine rich transmembrane protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378053 FLRT3-001 ENSG00000125848 9606 - 20:14322988-14337608 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000378053
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000378053 0.128±0.00 0.529±0.00 0.522±0.11 0.362±0.32 0.027±0.00 0.062±0.00 0.443±0.04 1.298±0.00 0.178±0.10 0.057±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DE CIL_0002DE_0001 CGP 20:13849247-16053197
CIL_0002DF CIL_0002DF_0001 CGP 20:13995369-16053197
CIL_0002DG CIL_0002DG_0001 CGP 20:14322988-16573433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005057 NAS receptor signaling protein activity
GO:0005515 IEA protein binding
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005887 NAS integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007411 IEA axon guidance
GO:0008150 ND biological_process
GO:0030674 NAS protein binding, bridging
GO:0035556 NAS intracellular signal transduction
GO:0045499 IEA chemorepellent activity
GO:0050919 IEA negative chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110057 Flrt3-001 protein_coding Mus_musculus 0 3489
ENSMUST00000056760 Flrt3-002 protein_coding Mus_musculus 0 3186
ENSDART00000143703 flrt3-001 protein_coding Danio_rerio 0 339

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