C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: barrier to autointegration factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125888 BANF2 9606 + 20:17693672-17735871 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000246090 BANF2-002 17699960-17735871 protein_coding
  ENST00000377805 BANF2-001 17699948-17735871 protein_coding
  ENST00000427254 BANF2-003 17699942-17725151 protein_coding
  ENST00000467330 BANF2-004 17731179-17735798 processed_transcript
  ENST00000545418 BANF2-005 17693672-17735860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeOvaryTestisENST00000246090ENST00000377805ENST00000427254ENST00000467330ENST00000545418
Transcript ID Adipose Ovary Testis
ENST00000246090 N/A N/A 11.783±1.69
ENST00000377805 N/A N/A 10.062±0.00
ENST00000427254 N/A 0.071±0.00 5.749±0.00
ENST00000467330 N/A 0.040±0.00 N/A
ENST00000545418 0.103±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694
CIL_0002DA CIL_0002DA_0001 CGP 20:17613678-17735871
CIL_0002MX CIL_0002MX_0001 CGP 20:17693672-17968980

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037307 Banf2 barrier to autointegration factor 2 protein_coding Mus_musculus

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