C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: barrier to autointegration factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037307 Banf2 10090 + 2:144033059-144073979 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037722 Banf2-002 144033059-144073979 protein_coding
  ENSMUST00000110032 Banf2-001 144033102-144073979 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartMusclePlacentaTestisENSMUST00000037722ENSMUST00000110032
Transcript ID Bladder Breast Heart Muscle Placenta Testis
ENSMUST00000037722 N/A N/A N/A 0.054±0.00 0.296±0.00 37.646±9.81
ENSMUST00000110032 0.032±0.00 0.154±0.02 0.131±0.01 N/A 1.316±1.27 61.201±21.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0002 VISTA 2:143876906-144478692
CIL_0002DA CIL_0002DA_0002 CGP 2:143947395-144073979
CIL_0002MX CIL_0002MX_0002 CGP 2:144033059-144270906

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125888 BANF2 barrier to autointegration factor 2 protein_coding Homo_sapiens

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