C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GLIS family zinc finger 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126603 GLIS2 9606 + 16:4314761-4339597 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262366 GLIS2-001 4314761-4339597 protein_coding
  ENST00000433375 GLIS2-201 4332224-4339597 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262366ENST00000433375
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A
ENST00000433375 3.010±0.00 7.430±0.00 0.514±0.00 1.423±1.36 7.616±0.00 3.689±3.58 1.687±1.49 7.998±7.91 0.441±0.10 10.490±9.54 0.374±0.14 28.212±24.61 6.675±2.58 6.114±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WQ CIL_0000WQ_0001 CGP 16:4257186-4339597
CIL_00009U CIL_00009U_0001 CGP 16:4314761-4355607

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0001077 ISS RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007399 IEA nervous system development
GO:0016607 ISS nuclear speck
GO:0030154 IEA cell differentiation
GO:0043433 ISS negative regulation of sequence-specific DNA binding transcription factor activity
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045879 ISS negative regulation of smoothened signaling pathway
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073861 OTTDARG00000032278 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000078388 GLIS2 (2 of 2) GLIS family zinc finger 2 protein_coding Danio_rerio
ENSMUSG00000014303 Glis2 GLIS family zinc finger 2 protein_coding Mus_musculus

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