C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 78, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126882 FAM78A 9606 - 9:131258076-131276547 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000247295 FAM78A-003 131258076-131264715 processed_transcript
  ENST00000372269 FAM78A-002 131258076-131270493 protein_coding
  ENST00000372271 FAM78A-001 131258076-131276547 protein_coding
  ENST00000464831 FAM78A-004 131260789-131270523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000247295ENST00000372269ENST00000372271ENST00000464831
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000247295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A
ENST00000372269 N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372271 1.197±0.00 5.836±0.00 N/A 1.162±0.43 1.120±0.36 0.531±0.00 4.929±3.51 0.642±0.32 0.327±0.09 2.477±1.13 4.118±0.24 1.465±0.68 5.471±1.20 7.275±0.36
ENST00000464831 N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A 0.927±0.00 N/A 8.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0001 VISTA 9:131030990-131632063
CIL_0002EO CIL_0002EO_0002 CGP 9:131125561-131276547
CIL_0002VI CIL_0002VI_0002 CGP 9:131258076-131309262

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059536 fam78aa family with sequence similarity 78, member Aa protein_coding Danio_rerio
ENSDARG00000088222 fam78ab family with sequence similarity 78, member Ab protein_coding Danio_rerio
ENSMUSG00000050592 Fam78a family with sequence similarity 78, member A protein_coding Mus_musculus

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