C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002EO_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000016212-ENSDARG00000088222 | CGP | 7955 | 5:74986957-75109360  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000016212  (nup214)nucleoporin 214 |
ENSDART00000035580 (nup214-201)
|
75073360-75084806 | protein_coding | |
|
ENSDART00000115182 (nup214-202)
|
74986957-75084608 | protein_coding | ||
|
ENSDARG00000088222 (fam78ab) family with sequence similarity 78, member Ab |
ENSDART00000124587 (fam78ab-201)
|
75097257-75109360 | protein_coding | |
| CIL_0002EO_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000126883-ENSG00000126882 | CGP | 9606 | 9:131125561-131276547 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000126882 (FAM78A) family with sequence similarity 78, member A |
ENST00000247295 (FAM78A-003)
|
131258076-131264715 | processed_transcript | |
|
ENST00000372269 (FAM78A-002)
|
131258076-131270493 | protein_coding | ||
|
ENST00000372271 (FAM78A-001)
|
131258076-131276547 | protein_coding | ||
|
ENST00000464831 (FAM78A-004)
|
131260789-131270523 | protein_coding | ||
|
ENSG00000126883 (NUP214) nucleoporin 214kDa |
ENST00000359428 (NUP214-001)
|
131125561-131234670 | protein_coding | |
|
ENST00000411637 (NUP214-010)
|
131125586-131234663 | protein_coding | ||
|
ENST00000451030 (NUP214-201)
|
131126034-131233701 | protein_coding | ||
|
ENST00000453861 (NUP214-028)
|
131187312-131233701 | nonsense_mediated_decay | ||
|
ENST00000465486 (NUP214-019)
|
131190126-131197843 | processed_transcript | ||
|
ENST00000470765 (NUP214-005)
|
131187358-131197687 | processed_transcript | ||
|
ENST00000476004 (NUP214-006)
|
131228224-131233707 | protein_coding | ||
|
ENST00000483497 (NUP214-009)
|
131190121-131233703 | protein_coding | ||
|
ENST00000489260 (NUP214-008)
|
131163100-131164549 | retained_intron | ||
|
ENST00000496921 (NUP214-004)
|
131228518-131233008 | retained_intron | ||
|
ENST00000498010 (NUP214-007)
|
131228175-131232469 | protein_coding | ||
|
ENST00000524578 (NUP214-020)
|
131187114-131195341 | retained_intron | ||
|
ENST00000525384 (NUP214-024)
|
131192124-131197886 | retained_intron | ||
|
ENST00000525561 (NUP214-013)
|
131132646-131135266 | retained_intron | ||
|
ENST00000525980 (NUP214-011)
|
131144702-131195658 | retained_intron | ||
|
ENST00000526346 (NUP214-021)
|
131174168-131192292 | nonsense_mediated_decay | ||
|
ENST00000526412 (NUP214-012)
|
131128528-131130836 | processed_transcript | ||
|
ENST00000528114 (NUP214-022)
|
131190143-131197613 | processed_transcript | ||
|
ENST00000528406 (NUP214-027)
|
131228294-131233704 | protein_coding | ||
|
ENST00000529286 (NUP214-026)
|
131197338-131198332 | processed_transcript | ||
|
ENST00000530491 (NUP214-023)
|
131222498-131228228 | retained_intron | ||
|
ENST00000530630 (NUP214-017)
|
131149951-131151884 | processed_transcript | ||
|
ENST00000530843 (NUP214-014)
|
131133197-131139349 | processed_transcript | ||
|
ENST00000530863 (NUP214-015)
|
131135988-131146193 | protein_coding | ||
|
ENST00000531584 (NUP214-025)
|
131126080-131129311 | protein_coding | ||
|
ENST00000531600 (NUP214-018)
|
131190139-131198648 | protein_coding | ||
|
ENST00000531929 (NUP214-016)
|
131175720-131197330 | processed_transcript | ||
|
ENSG00000226987 (RP11-544A12.5) |
ENST00000446606 (RP11-544A12.5-001)
|
131240687-131241724 | processed_pseudogene | |
| CIL_0002EO_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000001855-ENSMUSG00000050592 | CGP | 10090 | 2:31974436-32084857 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000001855 (Nup214) nucleoporin 214 |
ENSMUST00000065398 (Nup214-001)
|
31974436-32052371 | protein_coding | |
|
ENSMUST00000123062 (Nup214-007)
|
32025295-32031722 | processed_transcript | ||
|
ENSMUST00000124455 (Nup214-011)
|
32051692-32052365 | processed_transcript | ||
|
ENSMUST00000126301 (Nup214-005)
|
31997961-32004430 | processed_transcript | ||
|
ENSMUST00000129496 (Nup214-003)
|
31979772-31991361 | processed_transcript | ||
|
ENSMUST00000130185 (Nup214-006)
|
32010269-32011642 | processed_transcript | ||
|
ENSMUST00000130975 (Nup214-002)
|
31974486-31979956 | processed_transcript | ||
|
ENSMUST00000138012 (Nup214-008)
|
32033976-32053975 | protein_coding | ||
|
ENSMUST00000146138 (Nup214-010)
|
32050995-32052854 | processed_transcript | ||
|
ENSMUST00000152791 (Nup214-009)
|
32042518-32052367 | processed_transcript | ||
|
ENSMUST00000153096 (Nup214-004)
|
31994821-31998697 | processed_transcript | ||
|
ENSMUSG00000050592 (Fam78a) family with sequence similarity 78, member A |
ENSMUST00000056406 (Fam78a-001)
|
32066867-32083783 | protein_coding | |
|
ENSMUST00000130178 (Fam78a-003)
|
32069420-32079352 | processed_transcript | ||
|
ENSMUST00000139629 (Fam78a-004)
|
32050055-32084669 | nonsense_mediated_decay | ||
|
ENSMUST00000143795 (Fam78a-002)
|
32083272-32084857 | processed_transcript | ||
|
ENSMUSG00000081480 (Gm13608) predicted gene 13608 |
ENSMUST00000121807 (Gm13608-001)
|
31985059-31986464 | processed_pseudogene | |
|
ENSMUSG00000090157 (Gm16534) predicted gene 16534 |
ENSMUST00000149300 (Gm16534-001)
|
32050086-32064164 | processed_transcript | |
|
ENSMUST00000156387 (Gm16534-002)
|
32050881-32064911 | processed_transcript | ||
Expression Patterns
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