C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterochromatin protein 1, binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127483 HP1BP3 9606 - 1:20742661-20787323 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312239 HP1BP3-001 20742661-20786688 protein_coding
  ENST00000375000 HP1BP3-003 20775655-20786640 protein_coding
  ENST00000375003 HP1BP3-004 20742682-20775005 protein_coding
  ENST00000414993 HP1BP3-010 20776720-20786652 protein_coding
  ENST00000417710 HP1BP3-014 20773587-20786283 protein_coding
  ENST00000419490 HP1BP3-011 20776713-20786652 protein_coding
  ENST00000419948 HP1BP3-015 20747615-20776604 protein_coding
  ENST00000424732 HP1BP3-006 20757199-20787312 protein_coding
  ENST00000437575 HP1BP3-012 20776698-20787323 protein_coding
  ENST00000438032 HP1BP3-005 20757166-20787272 protein_coding
  ENST00000443615 HP1BP3-013 20779836-20786666 protein_coding
  ENST00000487117 HP1BP3-007 20775450-20780541 processed_transcript
  ENST00000488722 HP1BP3-009 20743135-20749747 processed_transcript
  ENST00000491748 HP1BP3-008 20745592-20750251 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312239ENST00000375003ENST00000417710ENST00000424732ENST00000487117ENST00000488722
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312239 25.136±0.00 2.478±0.00 17.710±0.00 26.711±0.00 3.328±0.00 6.042±5.22 8.236±4.56 5.769±0.04 N/A 6.531±4.01 14.612±10.49 10.105±2.47 8.777±0.00
ENST00000375003 N/A 2.690±0.00 N/A 5.959±0.00 5.244±0.00 0.703±0.00 N/A 3.227±1.10 4.934±0.61 N/A 14.356±8.34 N/A 7.080±3.62
ENST00000417710 N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.696±0.00 N/A 20.740±0.00 22.301±0.00
ENST00000424732 N/A 4.181±0.00 50.804±0.00 N/A 22.827±0.00 1.904±0.00 4.834±0.00 N/A N/A N/A N/A N/A 19.904±0.00
ENST00000487117 N/A 5.619±0.00 N/A N/A 12.445±0.00 2.125±0.00 6.934±0.00 N/A N/A N/A 15.102±0.13 N/A 6.235±0.00
ENST00000488722 N/A 12.101±0.00 33.223±0.00 N/A 24.798±0.00 4.809±0.00 16.419±0.00 18.825±0.00 21.593±0.00 26.320±11.15 25.419±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA:IDA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044669 hp1bp3 heterochromatin protein 1, binding protein 3 protein_coding Danio_rerio
ENSMUSG00000028759 Hp1bp3 heterochromatin protein 1, binding protein 3 protein_coding Mus_musculus

Loading