Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	heterochromatin protein 1, binding protein 3
ENST00000312239	HP1BP3-001	ENSG00000127483	9606	-	1:20742661-20786688	protein_coding

Expression Patterns

Transcript ID	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Muscle	Ovary	Placenta	Testis
ENST00000312239	25.136±0.00	2.478±0.00	17.710±0.00	26.711±0.00	3.328±0.00	6.042±5.22	8.236±4.56	5.769±0.04	6.531±4.01	14.612±10.49	10.105±2.47	8.777±0.00

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000786	IEA	nucleosome
GO:0003677	IEA	DNA binding
GO:0005634	IEA:IDA	nucleus
GO:0006334	IEA	nucleosome assembly

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000165861	Hp1bp3-203	protein_coding	Mus_musculus	0	2185
ENSMUST00000030541	Hp1bp3-201	protein_coding	Mus_musculus	0	2156
ENSMUST00000105827	Hp1bp3-001	protein_coding	Mus_musculus	0	2150
ENSMUST00000105826	Hp1bp3-010	protein_coding	Mus_musculus	0	2143
ENSMUST00000097836	Hp1bp3-202	protein_coding	Mus_musculus	0	1906
ENSMUST00000105825	Hp1bp3-002	protein_coding	Mus_musculus	0	1901
ENSMUST00000148681	Hp1bp3-008	protein_coding	Mus_musculus	0	1013
ENSMUST00000154581	Hp1bp3-011	retained_intron	Mus_musculus	0	780
ENSMUST00000137851	Hp1bp3-004	protein_coding	Mus_musculus	0	769
ENSMUST00000124305	Hp1bp3-007	protein_coding	Mus_musculus	0	484
ENSMUST00000130071	Hp1bp3-005	protein_coding	Mus_musculus	0	453
ENSMUST00000155344	Hp1bp3-009	processed_transcript	Mus_musculus	0	403
ENSMUST00000137865	Hp1bp3-006	protein_coding	Mus_musculus	0	388
ENSMUST00000108492	Hif3a-002	protein_coding	Mus_musculus	0.0000004	62
ENSMUST00000146436	Accs-004	retained_intron	Mus_musculus	0.000006	58

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