C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterochromatin protein 1, binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375003 HP1BP3-004 ENSG00000127483 9606 - 1:20742682-20775005 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungOvaryTestisENST00000375003
Transcript ID Bladder Breast Colon Heart Liver Lung Ovary Testis
ENST00000375003 2.690±0.00 5.959±0.00 5.244±0.00 0.703±0.00 3.227±1.10 4.934±0.61 14.356±8.34 7.080±3.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IDA:IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030541 Hp1bp3-201 protein_coding Mus_musculus 0 1604
ENSMUST00000097836 Hp1bp3-202 protein_coding Mus_musculus 0 1604
ENSMUST00000165861 Hp1bp3-203 protein_coding Mus_musculus 0 1604
ENSMUST00000105826 Hp1bp3-010 protein_coding Mus_musculus 0 1598
ENSMUST00000105825 Hp1bp3-002 protein_coding Mus_musculus 0 1598
ENSMUST00000105827 Hp1bp3-001 protein_coding Mus_musculus 0 1598
ENSMUST00000148681 Hp1bp3-008 protein_coding Mus_musculus 0 1013
ENSMUST00000137851 Hp1bp3-004 protein_coding Mus_musculus 0 470
ENSMUST00000155344 Hp1bp3-009 processed_transcript Mus_musculus 0 403
ENSMUST00000124305 Hp1bp3-007 protein_coding Mus_musculus 0 357
ENSMUST00000154581 Hp1bp3-011 retained_intron Mus_musculus 0 230
ENSMUST00000137865 Hp1bp3-006 protein_coding Mus_musculus 9.94922e-44 183
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0.0000005 62
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0.000007 58

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