C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterochromatin protein 1, binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028759 Hp1bp3 10090 + 4:138216296-138244683 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030541 Hp1bp3-201 138216627-138243170 protein_coding
  ENSMUST00000097836 Hp1bp3-202 138216627-138243170 protein_coding
  ENSMUST00000105825 Hp1bp3-002 138216635-138244683 protein_coding
  ENSMUST00000105826 Hp1bp3-010 138216627-138243148 protein_coding
  ENSMUST00000105827 Hp1bp3-001 138216296-138244683 protein_coding
  ENSMUST00000124305 Hp1bp3-007 138216634-138228775 protein_coding
  ENSMUST00000130071 Hp1bp3-005 138217294-138223550 protein_coding
  ENSMUST00000137851 Hp1bp3-004 138217127-138229757 protein_coding
  ENSMUST00000137865 Hp1bp3-006 138216626-138226023 protein_coding
  ENSMUST00000142420 Hp1bp3-003 138216600-138221657 processed_transcript
  ENSMUST00000148681 Hp1bp3-008 138228583-138240735 protein_coding
  ENSMUST00000154581 Hp1bp3-011 138217268-138229744 retained_intron
  ENSMUST00000155344 Hp1bp3-009 138229657-138234557 processed_transcript
  ENSMUST00000165861 Hp1bp3-203 138217131-138243170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030541ENSMUST00000097836ENSMUST00000105826ENSMUST00000137851ENSMUST00000137865ENSMUST00000154581ENSMUST00000165861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030541 28.227±5.72 37.122±6.29 41.720±1.01 39.556±1.45 29.951±2.44 22.726±2.70 15.810±2.61 29.255±3.46 16.815±3.23 39.829±4.78 10.852±1.49 35.967±3.47 13.293±4.46 4.961±0.85
ENSMUST00000097836 8.665±0.00 N/A 12.652±1.21 41.428±6.17 7.888±1.49 6.000±0.71 7.720±2.59 6.940±0.82 6.160±1.36 10.697±0.72 8.049±1.87 37.784±12.38 17.003±10.27 2.258±0.55
ENSMUST00000105826 N/A 12.535±0.61 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.671±0.94 N/A N/A
ENSMUST00000137851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.095±0.00
ENSMUST00000137865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 162.347±0.00 53.256±0.00 14.590±0.00
ENSMUST00000154581 8.528±2.75 N/A 8.166±0.00 9.498±1.14 7.190±1.20 6.046±0.00 3.543±0.39 N/A 5.959±1.47 11.229±0.77 N/A 10.761±0.89 4.667±0.64 2.037±0.14
ENSMUST00000165861 N/A N/A N/A N/A N/A N/A N/A N/A 4.906±0.88 N/A N/A N/A N/A 1.663±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044669 hp1bp3 heterochromatin protein 1, binding protein 3 protein_coding Danio_rerio
ENSG00000127483 HP1BP3 heterochromatin protein 1, binding protein 3 protein_coding Homo_sapiens

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