C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor necrosis factor receptor superfamily, member 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127863 TNFRSF19 9606 + 13:23570370-23676104 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000248484 TNFRSF19-004 23570370-23674889 protein_coding
  ENST00000382258 TNFRSF19-001 23579360-23669273 protein_coding
  ENST00000382263 TNFRSF19-002 23579380-23676093 protein_coding
  ENST00000403372 TNFRSF19-201 23570370-23676104 protein_coding
  ENST00000464735 TNFRSF19-003 23579359-23594411 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248484ENST00000382263ENST00000403372
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248484 N/A N/A 2.363±0.00 N/A N/A 0.298±0.13 1.181±0.00 N/A 0.671±0.00 2.334±0.00 0.287±0.24 6.259±0.00 1.732±0.00 N/A
ENST00000382263 0.704±0.00 0.100±0.00 N/A 0.526±0.00 1.167±0.00 0.484±0.00 0.905±0.00 1.960±1.47 0.501±0.30 3.841±0.00 0.034±0.00 4.228±2.66 2.423±0.32 2.194±0.29
ENST00000403372 N/A 0.367±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0001 VISTA 13:23315305-23916480
CIL_0008P8 CIL_0008P8_0001 VISTA 13:23315865-23916052

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001942 IEA hair follicle development
GO:0005031 NAS tumor necrosis factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0006915 NAS apoptotic process
GO:0007254 NAS JNK cascade
GO:0016021 NAS integral component of membrane
GO:0033209 NAS tumor necrosis factor-mediated signaling pathway
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041869 tnfrsf19 tumor necrosis factor receptor superfamily, member 19 protein_coding Danio_rerio
ENSMUSG00000060548 Tnfrsf19 tumor necrosis factor receptor superfamily, member 19 protein_coding Mus_musculus

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