C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382263 TNFRSF19-002 ENSG00000127863 9606 + 13:23579380-23676093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382263
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382263 0.704±0.00 0.100±0.00 0.526±0.00 1.167±0.00 0.484±0.00 0.905±0.00 1.960±1.47 0.501±0.30 3.841±0.00 0.034±0.00 4.228±2.66 2.423±0.32 2.194±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0001 VISTA 13:23315305-23916480
CIL_0008P8 CIL_0008P8_0001 VISTA 13:23315865-23916052

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005031 NAS tumor necrosis factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0006915 NAS apoptotic process
GO:0007254 NAS JNK cascade
GO:0016021 NAS integral component of membrane
GO:0033209 NAS tumor necrosis factor-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111236 Tnfrsf19-202 protein_coding Mus_musculus 0 846
ENSMUST00000111234 Tnfrsf19-201 protein_coding Mus_musculus 0 846

Loading