C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248484 TNFRSF19-004 ENSG00000127863 9606 + 13:23570370-23674889 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartLiverLungMuscleOvaryPlacentaENST00000248484
Transcript ID Bladder Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000248484 2.363±0.00 0.298±0.13 1.181±0.00 0.671±0.00 2.334±0.00 0.287±0.24 6.259±0.00 1.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZO CIL_0007ZO_0001 VISTA 13:23315305-23916480
CIL_0008P8 CIL_0008P8_0001 VISTA 13:23315865-23916052

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005031 NAS tumor necrosis factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0006915 NAS apoptotic process
GO:0007254 NAS JNK cascade
GO:0016021 NAS integral component of membrane
GO:0033209 NAS tumor necrosis factor-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111234 Tnfrsf19-201 protein_coding Mus_musculus 0 939
ENSMUST00000111236 Tnfrsf19-202 protein_coding Mus_musculus 0 846

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