C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial transcription termination factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127989 MTERF1 9606 - 7:91692008-91880720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000351870 MTERF1-003 91872891-91880720 protein_coding
  ENST00000406735 MTERF1-004 91873322-91880692 protein_coding
  ENST00000419292 MTERF1-002 91870929-91880702 protein_coding
  ENST00000425936 MTERF1-005 91874654-91880663 protein_coding
  ENST00000442961 MTERF1-008 91874318-91880690 protein_coding
  ENST00000454222 MTERF1-009 91692008-91880690 processed_transcript
  ENST00000456229 MTERF1-007 91874315-91880679 protein_coding
  ENST00000481516 MTERF1-006 91876895-91880439 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000351870ENST00000406735ENST00000419292ENST00000425936ENST00000442961ENST00000481516
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000351870 0.483±0.00 1.588±0.00 N/A 1.011±0.18 0.848±0.00 0.877±0.44 0.714±0.63 2.098±0.59 0.985±0.32 0.557±0.32 0.504±0.00 1.561±1.05 0.865±0.46 1.956±1.33
ENST00000406735 N/A N/A 1.278±0.00 N/A 0.425±0.00 1.625±0.00 N/A N/A N/A N/A N/A 1.370±0.00 N/A 1.931±0.00
ENST00000419292 N/A N/A 0.360±0.00 0.513±0.00 0.450±0.00 0.227±0.05 0.134±0.00 N/A 0.289±0.12 0.371±0.00 0.038±0.00 0.554±0.33 0.085±0.00 N/A
ENST00000425936 N/A N/A N/A N/A N/A N/A N/A 1.684±0.00 N/A N/A N/A N/A N/A N/A
ENST00000442961 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 0.640±0.00 N/A N/A N/A
ENST00000481516 N/A N/A N/A N/A N/A N/A N/A 2.862±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SZ CIL_0004SZ_0002 CGP 7:91692008-92110673

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003690 IDA:IEA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005739 TAS:IEA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006353 IDA DNA-templated transcription, termination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006390 TAS transcription from mitochondrial promoter
GO:0006393 IDA termination of mitochondrial transcription
GO:0010467 TAS gene expression
GO:0032392 IDA DNA geometric change
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086107 MTERF1 mitochondrial transcription termination factor 1 protein_coding Danio_rerio
ENSMUSG00000040429 Mterf1a mitochondrial transcription termination factor 1a protein_coding Mus_musculus
ENSMUSG00000053178 Mterf1b mitochondrial transcription termination factor 1b protein_coding Mus_musculus

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