C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial transcription termination factor 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040429 Mterf1a 10090 - 5:3890581-3893933 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044746 Mterf1a-001 3890581-3893933 protein_coding
  ENSMUST00000117463 Mterf1a-002 3890584-3893907 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044746ENSMUST00000117463
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044746 0.305±0.00 N/A 1.122±0.61 0.503±0.03 0.262±0.03 N/A 0.096±0.01 0.169±0.00 1.436±0.81 N/A 0.156±0.06 0.837±0.45 1.004±0.49 0.655±0.00
ENSMUST00000117463 0.780±0.16 0.869±0.32 0.419±0.00 0.954±0.20 1.061±0.62 1.559±0.18 0.275±0.08 0.613±0.18 0.482±0.10 1.571±0.27 0.135±0.03 1.351±0.58 0.275±0.14 0.963±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SZ CIL_0004SZ_0003 CGP 5:3890581-4080209

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003690 ISS double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0006353 ISS DNA-templated transcription, termination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006393 ISS termination of mitochondrial transcription
GO:0032392 ISS DNA geometric change

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086107 MTERF1 mitochondrial transcription termination factor 1 protein_coding Danio_rerio
ENSG00000127989 MTERF1 mitochondrial transcription termination factor 1 protein_coding Homo_sapiens

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