C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: filamin C, gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128591 FLNC 9606 + 7:128830377-128859274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325888 FLNC-001 128830377-128859272 protein_coding
  ENST00000346177 FLNC-002 128830426-128859274 protein_coding
  ENST00000388853 FLNC-003 128841331-128842858 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325888ENST00000346177
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325888 5.002±0.00 25.871±0.00 7.279±0.00 10.381±1.06 54.176±43.95 18.312±11.70 3.883±0.00 53.441±0.00 16.984±0.00 N/A 12.294±8.68 2.937±0.69 32.453±0.00
ENST00000346177 N/A N/A N/A 3.908±0.28 N/A 73.364±52.51 0.127±0.00 N/A 1.015±0.00 625.542±450.90 1.200±0.00 N/A 5.274±4.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UF CIL_0005UF_0003 CGP 7:128790757-128859274

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0008092 IPI cytoskeletal protein binding
GO:0016528 IEA sarcoplasm
GO:0030506 IPI ankyrin binding
GO:0034329 TAS cell junction assembly
GO:0042383 IDA sarcolemma
GO:0043034 TAS costamere
GO:0048747 IEA muscle fiber development
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018566 flnca filamin C, gamma a (actin binding protein 280) protein_coding Danio_rerio
ENSDARG00000018820 flncb filamin C, gamma b (actin binding protein 280) protein_coding Danio_rerio
ENSMUSG00000068699 Flnc filamin C, gamma protein_coding Mus_musculus

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