C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: filamin C, gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068699 Flnc 10090 + 6:29433153-29461888 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065090 Flnc-002 29433276-29461849 protein_coding
  ENSMUST00000090474 Flnc-201 29433153-29461888 protein_coding
  ENSMUST00000101617 Flnc-001 29433276-29461849 protein_coding
  ENSMUST00000148404 Flnc-003 29433256-29439056 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065090ENSMUST00000090474ENSMUST00000101617ENSMUST00000148404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065090 3.733±0.82 0.367±0.05 N/A N/A 1.037±0.29 6.199±1.53 N/A 0.132±0.00 N/A 0.953±0.11 N/A 4.416±2.73 N/A 0.483±0.00
ENSMUST00000090474 6.488±4.83 0.254±0.10 20.446±6.34 1.457±0.71 3.030±1.64 8.067±3.60 13.051±1.51 0.413±0.25 0.126±0.09 1.353±0.62 41.267±2.40 8.508±2.45 3.978±2.13 0.474±0.20
ENSMUST00000101617 N/A 0.042±0.00 N/A 0.286±0.09 2.632±2.06 N/A 8.537±1.38 0.257±0.16 0.018±0.00 1.797±0.38 31.246±5.48 N/A N/A 0.355±0.00
ENSMUST00000148404 N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.04 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UF CIL_0005UF_0004 CGP 6:29396309-29461888

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 TAS actin binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0008092 IEA cytoskeletal protein binding
GO:0015629 TAS actin cytoskeleton
GO:0016020 IEA membrane
GO:0016528 IEA sarcoplasm
GO:0030029 TAS actin filament-based process
GO:0030506 IEA ankyrin binding
GO:0042383 IEA sarcolemma
GO:0048747 IDA muscle fiber development
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018566 flnca filamin C, gamma a (actin binding protein 280) protein_coding Danio_rerio
ENSDARG00000018820 flncb filamin C, gamma b (actin binding protein 280) protein_coding Danio_rerio
ENSG00000128591 FLNC filamin C, gamma protein_coding Homo_sapiens

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