C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ChaC, cation transport regulator homolog 1 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617961 CHAC1-004 ENSG00000128965 9606 + 15:40953493-40956512 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000617961
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000617961 0.348±0.00 3.545±0.00 0.378±0.08 0.604±0.00 3.229±0.00 0.169±0.00 1.553±1.34 10.411±6.66 9.243±9.58 0.574±0.29 0.557±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IN CIL_0005IN_0002 CGP 15:40929340-40956519
CIL_0005IM CIL_0005IM_0002 CGP 15:40952962-41116354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005112 ISS Notch binding
GO:0005515 IPI protein binding
GO:0005802 ISS trans-Golgi network
GO:0005829 IDA cytosol
GO:0006986 IEA response to unfolded protein
GO:0007219 IEA Notch signaling pathway
GO:0010955 IMP negative regulation of protein processing
GO:0022008 ISS neurogenesis
GO:0045746 IMP negative regulation of Notch signaling pathway
GO:0070059 IMP intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028780 Chac1-001 protein_coding Mus_musculus 0 878

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