C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 1, mu 2 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129354 AP1M2 9606 - 19:10572671-10587315 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000250244 AP1M2-002 10572672-10587314 protein_coding
  ENST00000587069 AP1M2-008 10572671-10577314 protein_coding
  ENST00000589348 AP1M2-009 10572689-10577231 protein_coding
  ENST00000589571 AP1M2-004 10581746-10587299 nonsense_mediated_decay
  ENST00000589684 AP1M2-006 10579736-10587250 protein_coding
  ENST00000589809 AP1M2-005 10583560-10587219 retained_intron
  ENST00000590923 AP1M2-001 10572671-10587315 protein_coding
  ENST00000591240 AP1M2-010 10577272-10587219 protein_coding
  ENST00000591676 AP1M2-003 10581282-10587295 protein_coding
  ENST00000592285 AP1M2-007 10574358-10577272 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000250244ENST00000587069ENST00000589348ENST00000589571ENST00000589684ENST00000590923ENST00000591240ENST00000592285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000250244 N/A N/A 1.612±0.00 N/A 1.752±0.87 2.946±1.49 N/A 36.899±0.00 N/A 5.778±5.37 12.603±8.84 27.622±6.78 7.123±2.53
ENST00000587069 N/A 0.403±0.00 N/A 0.180±0.01 N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A
ENST00000589348 0.171±0.00 N/A N/A 0.416±0.00 2.359±0.00 8.578±0.00 0.044±0.00 22.987±0.00 1.424±0.00 N/A N/A N/A 4.357±0.00
ENST00000589571 N/A 0.518±0.00 0.934±0.00 0.199±0.00 N/A N/A N/A N/A 2.235±0.00 2.648±0.00 N/A N/A N/A
ENST00000589684 0.199±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590923 N/A N/A N/A N/A N/A 1.473±0.00 N/A N/A 0.091±0.04 3.497±0.00 5.809±0.00 4.771±0.00 N/A
ENST00000591240 N/A N/A N/A N/A 1.352±0.00 3.916±0.00 N/A N/A N/A 2.540±0.00 N/A N/A N/A
ENST00000592285 0.206±0.00 N/A N/A 0.346±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000494 CIL_000494_0001 CGP 19:10566462-10587315
CIL_000491 CIL_000491_0001 CGP 19:10572671-10644559

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006605 TAS protein targeting
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0006903 TAS vesicle targeting
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026759 AP1M2 (1 of 2) adaptor-related protein complex 1, mu 2 subunit protein_coding Danio_rerio
ENSDARG00000096454 ap1m2 adaptor-related protein complex 1, mu 2 subunit protein_coding Danio_rerio
ENSMUSG00000003309 Ap1m2 adaptor protein complex AP-1, mu 2 subunit protein_coding Mus_musculus

Loading