C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000494_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129355-ENSG00000129354 CGP 9606 19:10566462-10587315
GeneTranscriptPositionBiotype
ENSG00000129354 (AP1M2)
adaptor-related protein complex 1, mu 2 subunit 		ENST00000250244 (AP1M2-002) 10572672-10587314 protein_coding
ENST00000587069 (AP1M2-008) 10572671-10577314 protein_coding
ENST00000589348 (AP1M2-009) 10572689-10577231 protein_coding
ENST00000589571 (AP1M2-004) 10581746-10587299 nonsense_mediated_decay
ENST00000589684 (AP1M2-006) 10579736-10587250 protein_coding
ENST00000589809 (AP1M2-005) 10583560-10587219 retained_intron
ENST00000590923 (AP1M2-001) 10572671-10587315 protein_coding
ENST00000591240 (AP1M2-010) 10577272-10587219 protein_coding
ENST00000591676 (AP1M2-003) 10581282-10587295 protein_coding
ENST00000592285 (AP1M2-007) 10574358-10577272 protein_coding
ENSG00000129355 (CDKN2D)
cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) 		ENST00000335766 (CDKN2D-002) 10566601-10569059 protein_coding
ENST00000393599 (CDKN2D-001) 10566462-10568978 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_000494_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096472-ENSMUSG00000003309 CGP 10090 9:21288463-21312333
GeneTranscriptPositionBiotype
ENSMUSG00000003309 (Ap1m2)
adaptor protein complex AP-1, mu 2 subunit 		ENSMUST00000003397 (Ap1m2-201) 21295457-21312333 protein_coding
ENSMUST00000115433 (Ap1m2-202) 21295457-21312333 protein_coding
ENSMUSG00000096472 (Cdkn2d)
cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) 		ENSMUST00000086374 (Cdkn2d-201) 21288463-21291209 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000494_0001ENSG00000129354ENST00000250244ENST00000587069ENST00000589348ENST00000589571ENST00000589684ENST00000589809ENST00000590923ENST00000591240ENST00000591676ENST00000592285ENSG00000129355ENST00000335766ENST00000393599CIL_000494_0002ENSMUSG00000003309ENSMUST00000003397ENSMUST00000115433ENSMUSG00000096472ENSMUST00000086374
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000494_0001ENSG00000129354ENST00000250244ENST00000587069ENST00000589348ENST00000589571ENST00000589684ENST00000590923ENST00000591240ENST00000592285ENSG00000129355ENST00000335766ENST00000393599CIL_000494_0002ENSMUSG00000003309ENSMUST00000003397ENSMUST00000115433ENSMUSG00000096472ENSMUST00000086374
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129354 ENST00000250244 N/A N/A 1.612±0.00 N/A 1.752±0.87 2.946±1.49 N/A 36.899±0.00 N/A 5.778±5.37 N/A 12.603±8.84 27.622±6.78 7.123±2.53
ENST00000587069 N/A 0.403±0.00 N/A 0.180±0.01 N/A N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A
ENST00000589348 0.171±0.00 N/A N/A 0.416±0.00 2.359±0.00 8.578±0.00 0.044±0.00 22.987±0.00 1.424±0.00 N/A N/A N/A N/A 4.357±0.00
ENST00000589571 N/A 0.518±0.00 0.934±0.00 0.199±0.00 N/A N/A N/A N/A 2.235±0.00 2.648±0.00 N/A N/A N/A N/A
ENST00000589684 0.199±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590923 N/A N/A N/A N/A N/A 1.473±0.00 N/A N/A 0.091±0.04 3.497±0.00 N/A 5.809±0.00 4.771±0.00 N/A
ENST00000591240 N/A N/A N/A N/A 1.352±0.00 3.916±0.00 N/A N/A N/A 2.540±0.00 N/A N/A N/A N/A
ENST00000591676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592285 0.206±0.00 N/A N/A 0.346±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129355 ENST00000335766 11.717±0.00 14.276±0.00 0.285±0.00 20.448±14.82 5.436±0.00 5.135±4.94 1.630±1.30 2.863±2.15 1.316±0.00 14.602±13.89 1.850±1.76 2.789±1.29 6.017±0.96 21.846±2.70
ENST00000393599 2.092±0.00 6.208±0.00 N/A 7.803±0.28 0.729±0.23 1.101±0.98 1.866±0.00 1.546±0.00 0.474±0.28 8.133±8.04 1.610±0.00 1.467±1.10 2.383±1.05 3.930±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003309 ENSMUST00000003397 3.142±3.12 0.030±0.00 10.261±0.80 0.335±0.10 4.355±1.49 24.448±7.49 0.221±0.00 8.528±2.33 0.084±0.08 8.443±2.66 0.021±0.00 6.756±2.67 18.611±5.75 0.827±0.69
ENSMUST00000115433 1.411±1.41 0.006±0.00 3.970±0.87 0.178±0.01 3.117±1.88 13.187±4.75 0.291±0.00 3.807±1.12 0.065±0.05 4.344±1.21 0.011±0.01 3.583±2.48 7.211±1.90 0.369±0.12
ENSMUSG00000096472 ENSMUST00000086374 12.528±1.01 16.542±2.38 9.115±0.63 23.436±7.41 19.235±9.05 13.967±2.41 8.954±0.78 8.610±0.76 25.548±25.32 13.654±2.70 7.750±0.71 10.679±4.15 9.519±4.28 26.178±12.17

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