C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shugoshin-like 1 (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129810 SGOL1 9606 - 3:20160593-20186292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263753 SGOL1-009 20160593-20186191 protein_coding
  ENST00000306698 SGOL1-001 20160593-20186191 protein_coding
  ENST00000412997 SGOL1-002 20170053-20186292 protein_coding
  ENST00000417364 SGOL1-004 20170644-20186127 protein_coding
  ENST00000419233 SGOL1-005 20160593-20186191 protein_coding
  ENST00000421451 SGOL1-010 20161009-20186127 protein_coding
  ENST00000425061 SGOL1-006 20161009-20186127 protein_coding
  ENST00000437051 SGOL1-003 20170485-20186191 protein_coding
  ENST00000442720 SGOL1-012 20169481-20186206 protein_coding
  ENST00000443724 SGOL1-007 20161009-20186127 protein_coding
  ENST00000452020 SGOL1-015 20161009-20186127 protein_coding
  ENST00000456624 SGOL1-018 20174722-20184032 nonsense_mediated_decay
  ENST00000460637 SGOL1-017 20170061-20171267 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263753ENST00000306698ENST00000412997ENST00000417364ENST00000421451ENST00000442720ENST00000443724ENST00000456624ENST00000460637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263753 N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.098±0.00 N/A 0.623±0.32 0.336±0.27 N/A
ENST00000306698 N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A 0.161±0.00 N/A
ENST00000412997 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 0.131±0.07 1.896±0.32
ENST00000417364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A 1.215±0.00
ENST00000421451 N/A N/A N/A N/A 0.540±0.00 N/A 0.011±0.00 N/A N/A N/A N/A 4.609±0.00 1.117±1.09 7.501±0.00
ENST00000442720 N/A N/A N/A 0.027±0.00 N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.197±0.16 0.088±0.00 N/A
ENST00000443724 N/A N/A N/A 0.126±0.00 N/A N/A 0.007±0.00 N/A N/A 0.128±0.00 N/A N/A N/A N/A
ENST00000456624 N/A N/A 0.078±0.00 N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000460637 0.088±0.00 0.437±0.00 N/A 0.234±0.00 0.176±0.00 1.048±0.00 0.075±0.00 0.105±0.00 0.205±0.00 0.299±0.00 0.148±0.00 0.433±0.37 0.305±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HV CIL_0004HV_0001 CGP 3:20040023-20186292

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 IDA:IEA chromosome, centromeric region
GO:0000776 IDA kinetochore
GO:0000779 IDA condensed chromosome, centromeric region
GO:0000780 IEA condensed nuclear chromosome, centromeric region
GO:0000922 IDA spindle pole
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0007059 IDA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0008608 IDA attachment of spindle microtubules to kinetochore
GO:0010457 IDA centriole-centriole cohesion
GO:0019900 IDA kinase binding
GO:0030892 IDA mitotic cohesin complex
GO:0045132 IMP:IEA meiotic chromosome segregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069916 SGOL1 shugoshin-like 1 (S. pombe) protein_coding Danio_rerio
ENSMUSG00000023940 Sgol1 shugoshin-like 1 (S. pombe) protein_coding Mus_musculus

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