C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shugoshin-like 1 (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263753 SGOL1-009 ENSG00000129810 9606 - 3:20160593-20186191 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryPlacentaENST00000263753
Transcript ID Liver Lung Ovary Placenta
ENST00000263753 0.056±0.00 0.098±0.00 0.623±0.32 0.336±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HV CIL_0004HV_0001 CGP 3:20040023-20186292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 IDA:IEA chromosome, centromeric region
GO:0000776 IDA kinetochore
GO:0000779 IDA condensed chromosome, centromeric region
GO:0000780 IEA condensed nuclear chromosome, centromeric region
GO:0000922 IDA spindle pole
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0007059 IDA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0008608 IDA attachment of spindle microtubules to kinetochore
GO:0010457 IDA centriole-centriole cohesion
GO:0019900 IDA kinase binding
GO:0030892 IDA mitotic cohesin complex
GO:0045132 IMP:IEA meiotic chromosome segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118752 Gm6982-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000024736 Sgol1-001 protein_coding Mus_musculus 0 462

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