C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114166-ENSG00000129810 CGP 9606 3:20040023-20186292
GeneTranscriptPositionBiotype
ENSG00000114166 (KAT2B)
K(lysine) acetyltransferase 2B 		ENST00000263754 (KAT2B-001) 20040023-20154404 protein_coding
ENST00000426228 (KAT2B-002) 20040698-20101113 processed_transcript
ENST00000468111 (KAT2B-004) 20127478-20146581 retained_intron
ENST00000468400 (KAT2B-005) 20148240-20149010 retained_intron
ENST00000469085 (KAT2B-003) 20111594-20122795 processed_transcript
ENSG00000129810 (SGOL1)
shugoshin-like 1 (S. pombe) 		ENST00000263753 (SGOL1-009) 20160593-20186191 protein_coding
ENST00000306698 (SGOL1-001) 20160593-20186191 protein_coding
ENST00000412997 (SGOL1-002) 20170053-20186292 protein_coding
ENST00000417364 (SGOL1-004) 20170644-20186127 protein_coding
ENST00000419233 (SGOL1-005) 20160593-20186191 protein_coding
ENST00000421451 (SGOL1-010) 20161009-20186127 protein_coding
ENST00000425061 (SGOL1-006) 20161009-20186127 protein_coding
ENST00000437051 (SGOL1-003) 20170485-20186191 protein_coding
ENST00000442720 (SGOL1-012) 20169481-20186206 protein_coding
ENST00000443724 (SGOL1-007) 20161009-20186127 protein_coding
ENST00000452020 (SGOL1-015) 20161009-20186127 protein_coding
ENST00000456624 (SGOL1-018) 20174722-20184032 nonsense_mediated_decay
ENST00000460637 (SGOL1-017) 20170061-20171267 processed_transcript
ENSG00000237485 (SGOL1-AS1)
SGOL1 antisense RNA 1 		ENST00000441442 (SGOL1-AS1-002) 20174286-20186115 antisense
ENST00000448208 (SGOL1-AS1-001) 20174244-20186427 antisense
ENSG00000266745 (MIR3135A)
microRNA 3135a 		ENST00000578460 (MIR3135A-201) 20137565-20137641 miRNA
CIL_0004HV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000708-ENSMUSG00000023940 CGP 10090 17:53566861-53689333
GeneTranscriptPositionBiotype
ENSMUSG00000000708 (Kat2b)
K(lysine) acetyltransferase 2B 		ENSMUST00000000724 (Kat2b-001) 53566971-53672720 protein_coding
ENSMUST00000163648 (Kat2b-003) 53566861-53624491 processed_transcript
ENSMUST00000164390 (Kat2b-002) 53584126-53638422 protein_coding
ENSMUST00000166525 (Kat2b-004) 53644697-53672071 protein_coding
ENSMUST00000167092 (Kat2b-005) 53659238-53663649 retained_intron
ENSMUST00000171072 (Kat2b-006) 53659395-53670687 nonsense_mediated_decay
ENSMUST00000172160 (Kat2b-007) 53659311-53663674 retained_intron
ENSMUSG00000023940 (Sgol1)
shugoshin-like 1 (S. pombe) 		ENSMUST00000024736 (Sgol1-001) 53674786-53689333 protein_coding
ENSMUST00000144474 (Sgol1-003) 53687560-53689286 processed_transcript
ENSMUST00000146019 (Sgol1-002) 53687707-53689278 processed_transcript
ENSMUSG00000096517 (Gm6919)
predicted gene 6919 		ENSMUST00000180049 (Gm6919-001) 53598181-53598663 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HV_0001ENSG00000114166ENST00000263754ENST00000426228ENST00000468111ENST00000468400ENST00000469085ENSG00000129810ENST00000263753ENST00000306698ENST00000412997ENST00000417364ENST00000419233ENST00000421451ENST00000425061ENST00000437051ENST00000442720ENST00000443724ENST00000452020ENST00000456624ENST00000460637ENSG00000237485ENST00000441442ENST00000448208ENSG00000266745ENST00000578460CIL_0004HV_0002ENSMUSG00000000708ENSMUST00000000724ENSMUST00000163648ENSMUST00000164390ENSMUST00000166525ENSMUST00000167092ENSMUST00000171072ENSMUST00000172160ENSMUSG00000023940ENSMUST00000024736ENSMUST00000144474ENSMUST00000146019ENSMUSG00000096517ENSMUST00000180049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HV_0001ENSG00000114166ENST00000263754ENST00000468111ENSG00000129810ENST00000263753ENST00000306698ENST00000412997ENST00000417364ENST00000421451ENST00000442720ENST00000443724ENST00000456624ENST00000460637ENSG00000237485ENST00000441442ENST00000448208ENSG00000266745ENST00000578460CIL_0004HV_0002ENSMUSG00000000708ENSMUST00000000724ENSMUST00000172160ENSMUSG00000023940ENSMUST00000024736ENSMUST00000144474ENSMUST00000146019ENSMUSG00000096517ENSMUST00000180049
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114166 ENST00000263754 6.170±0.00 5.164±0.00 2.326±0.00 9.122±4.02 6.065±4.02 4.380±2.49 11.539±8.07 4.015±2.50 4.307±0.74 4.711±1.20 7.075±4.25 3.723±2.25 2.969±0.47 2.653±1.79
ENST00000426228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.526±0.00 N/A N/A
ENST00000468400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129810 ENST00000263753 N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 0.098±0.00 N/A 0.623±0.32 0.336±0.27 N/A
ENST00000306698 N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A N/A 0.161±0.00 N/A
ENST00000412997 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 0.131±0.07 1.896±0.32
ENST00000417364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A 1.215±0.00
ENST00000419233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421451 N/A N/A N/A N/A 0.540±0.00 N/A 0.011±0.00 N/A N/A N/A N/A 4.609±0.00 1.117±1.09 7.501±0.00
ENST00000425061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442720 N/A N/A N/A 0.027±0.00 N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.197±0.16 0.088±0.00 N/A
ENST00000443724 N/A N/A N/A 0.126±0.00 N/A N/A 0.007±0.00 N/A N/A 0.128±0.00 N/A N/A N/A N/A
ENST00000452020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456624 N/A N/A 0.078±0.00 N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000460637 0.088±0.00 0.437±0.00 N/A 0.234±0.00 0.176±0.00 1.048±0.00 0.075±0.00 0.105±0.00 0.205±0.00 0.299±0.00 0.148±0.00 0.433±0.37 0.305±0.00 N/A
ENSG00000237485 ENST00000441442 N/A N/A N/A N/A N/A N/A 0.095±0.00 0.336±0.00 N/A N/A N/A N/A N/A N/A
ENST00000448208 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A 1.342±0.00 N/A 3.740±0.00
ENSG00000266745 ENST00000578460 N/A 0.437±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.396±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000708 ENSMUST00000000724 6.469±1.49 14.366±10.89 14.875±3.30 3.188±1.17 5.064±1.11 6.973±3.93 9.806±0.94 6.059±1.21 6.764±2.19 6.903±1.23 15.211±4.01 4.669±6.20 1.842±1.10 1.496±0.48
ENSMUST00000163648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172160 N/A N/A N/A 12.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.413±2.84 N/A
ENSMUSG00000023940 ENSMUST00000024736 0.282±0.30 0.046±0.00 0.256±0.00 1.353±0.95 0.141±0.05 0.620±0.32 0.019±0.01 0.051±0.04 7.237±5.94 0.132±0.06 0.016±0.01 1.321±0.73 4.026±3.75 0.353±0.07
ENSMUST00000144474 N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A 0.127±0.00 N/A N/A N/A N/A
ENSMUST00000146019 N/A 0.254±0.00 N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096517 ENSMUST00000180049 0.771±0.21 1.060±0.67 0.457±0.06 N/A 1.804±0.84 0.412±0.13 0.178±0.10 0.308±0.13 0.973±0.56 1.020±0.63 N/A 1.056±0.17 0.269±0.08 0.268±0.06

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