C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shugoshin-like 1 (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023940 Sgol1 10090 - 17:53674786-53689333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024736 Sgol1-001 53674786-53689333 protein_coding
  ENSMUST00000144474 Sgol1-003 53687560-53689286 processed_transcript
  ENSMUST00000146019 Sgol1-002 53687707-53689278 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024736ENSMUST00000144474ENSMUST00000146019
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024736 0.282±0.30 0.046±0.00 0.256±0.00 1.353±0.95 0.141±0.05 0.620±0.32 0.019±0.01 0.051±0.04 7.237±5.94 0.132±0.06 0.016±0.01 1.321±0.73 4.026±3.75 0.353±0.07
ENSMUST00000144474 N/A N/A N/A N/A N/A N/A 0.098±0.00 N/A N/A 0.127±0.00 N/A N/A N/A N/A
ENSMUST00000146019 N/A 0.254±0.00 N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HV CIL_0004HV_0002 CGP 17:53566861-53689333

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IDA chromosome, centromeric region
GO:0000776 ISS kinetochore
GO:0000779 IEA condensed chromosome, centromeric region
GO:0000780 IDA condensed nuclear chromosome, centromeric region
GO:0000922 ISO spindle pole
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0007059 ISS chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0008608 ISS attachment of spindle microtubules to kinetochore
GO:0010457 ISS centriole-centriole cohesion
GO:0019900 ISO kinase binding
GO:0030892 IEA mitotic cohesin complex
GO:0045132 ISO meiotic chromosome segregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069916 SGOL1 shugoshin-like 1 (S. pombe) protein_coding Danio_rerio
ENSG00000129810 SGOL1 shugoshin-like 1 (S. pombe) protein_coding Homo_sapiens

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