C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycerophosphodiester phosphodiesterase domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130055 GDPD2 9606 + X:70423031-70433390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374382 GDPD2-001 70423141-70433384 protein_coding
  ENST00000453994 GDPD2-201 70423031-70433390 protein_coding
  ENST00000472623 GDPD2-002 70425821-70433380 processed_transcript
  ENST00000536730 GDPD2-202 70423031-70433390 protein_coding
  ENST00000538649 GDPD2-203 70423031-70433390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartLiverMuscleOvaryPlacentaTestisENST00000374382ENST00000453994ENST00000472623ENST00000536730ENST00000538649
Transcript ID Adipose Bladder Brain Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000374382 N/A N/A N/A N/A N/A 0.010±0.00 N/A 0.509±0.00 0.680±0.28 1.035±0.00
ENST00000453994 0.023±0.00 N/A 0.164±0.00 0.059±0.03 N/A 0.022±0.00 N/A 0.064±0.00 N/A N/A
ENST00000472623 N/A N/A 0.414±0.00 0.038±0.00 0.071±0.02 0.076±0.00 N/A 0.193±0.13 0.134±0.00 N/A
ENST00000536730 N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A
ENST00000538649 N/A 0.243±0.00 N/A N/A N/A 0.010±0.00 0.032±0.00 0.081±0.07 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009H CIL_00009H_0001 CGP X:70290090-70433390
CIL_00009K CIL_00009K_0001 CGP X:70423031-70505490

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0047394 IEA glycerophosphoinositol inositolphosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073870 GDPD2 glycerophosphodiester phosphodiesterase domain containing 2 protein_coding Danio_rerio
ENSMUSG00000019359 Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 protein_coding Mus_musculus

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