C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00009H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090889-ENSG00000130055 CGP 9606 X:70290090-70433390
GeneTranscriptPositionBiotype
ENSG00000090889 (KIF4A)
kinesin family member 4A 		ENST00000374403 (KIF4A-001) 70290090-70420832 protein_coding
ENST00000485406 (KIF4A-002) 70290112-70297188 processed_transcript
ENSG00000120509 (PDZD11)
PDZ domain containing 11 		ENST00000239666 (PDZD11-007) 70286595-70289979 protein_coding
ENST00000374454 (PDZD11-005) 70286892-70289945 protein_coding
ENST00000473667 (PDZD11-008) 70287735-70289913 processed_transcript
ENST00000486461 (PDZD11-006) 70287767-70290514 processed_transcript
ENSG00000130055 (GDPD2)
glycerophosphodiester phosphodiesterase domain containing 2 		ENST00000374382 (GDPD2-001) 70423141-70433384 protein_coding
ENST00000453994 (GDPD2-201) 70423031-70433390 protein_coding
ENST00000472623 (GDPD2-002) 70425821-70433380 processed_transcript
ENST00000536730 (GDPD2-202) 70423031-70433390 protein_coding
ENST00000538649 (GDPD2-203) 70423031-70433390 protein_coding
ENSG00000201377 (RNY4P23)
RNA, Ro-associated Y4 pseudogene 23 		ENST00000364507 (RNY4P23-201) 70396279-70396375 misc_RNA
CIL_00009H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034311-ENSMUSG00000019359 CGP 10090 X:100625737-100738895
GeneTranscriptPositionBiotype
ENSMUSG00000015668 (Pdzd11)
PDZ domain containing 11 		ENSMUST00000015812 (Pdzd11-003) 100622886-100626568 protein_coding
ENSMUST00000059099 (Pdzd11-001) 100622908-100625935 protein_coding
ENSMUST00000144643 (Pdzd11-002) 100622883-100625938 retained_intron
ENSMUST00000151548 (Pdzd11-004) 100623377-100626271 processed_transcript
ENSMUSG00000019359 (Gdpd2)
glycerophosphodiester phosphodiesterase domain containing 2 		ENSMUST00000019503 (Gdpd2-001) 100729942-100738894 protein_coding
ENSMUST00000113744 (Gdpd2-005) 100730186-100738894 protein_coding
ENSMUST00000144912 (Gdpd2-004) 100729873-100732448 processed_transcript
ENSMUST00000151572 (Gdpd2-003) 100736340-100738895 retained_intron
ENSMUST00000156336 (Gdpd2-002) 100729938-100735213 retained_intron
ENSMUSG00000034311 (Kif4)
kinesin family member 4 		ENSMUST00000048962 (Kif4-001) 100625737-100727214 protein_coding
ENSMUST00000145319 (Kif4-003) 100712127-100724650 processed_transcript
ENSMUST00000156386 (Kif4-002) 100633960-100636307 retained_intron
ENSMUSG00000085314 (Gm14866)
predicted gene 14866 		ENSMUST00000149206 (Gm14866-001) 100736983-100740929 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009H_0001ENSG00000090889ENST00000374403ENST00000485406ENSG00000120509ENST00000239666ENST00000374454ENST00000473667ENST00000486461ENSG00000130055ENST00000374382ENST00000453994ENST00000472623ENST00000536730ENST00000538649ENSG00000201377ENST00000364507CIL_00009H_0002ENSMUSG00000015668ENSMUST00000015812ENSMUST00000059099ENSMUST00000144643ENSMUST00000151548ENSMUSG00000019359ENSMUST00000019503ENSMUST00000113744ENSMUST00000144912ENSMUST00000151572ENSMUST00000156336ENSMUSG00000034311ENSMUST00000048962ENSMUST00000145319ENSMUST00000156386ENSMUSG00000085314ENSMUST00000149206
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009H_0001ENSG00000090889ENST00000374403ENSG00000120509ENST00000239666ENST00000374454ENSG00000130055ENST00000374382ENST00000453994ENST00000472623ENST00000536730ENST00000538649ENSG00000201377ENST00000364507CIL_00009H_0002ENSMUSG00000015668ENSMUST00000015812ENSMUST00000059099ENSMUST00000144643ENSMUST00000151548ENSMUSG00000019359ENSMUST00000019503ENSMUST00000113744ENSMUST00000144912ENSMUST00000151572ENSMUST00000156336ENSMUSG00000034311ENSMUST00000048962ENSMUSG00000085314ENSMUST00000149206
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090889 ENST00000374403 N/A N/A 0.056±0.00 N/A 0.274±0.00 1.145±0.00 N/A N/A N/A 0.103±0.00 N/A 5.466±5.49 2.550±1.94 1.564±0.45
ENST00000485406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120509 ENST00000239666 10.120±0.00 11.896±0.00 0.423±0.00 16.655±4.08 8.097±4.78 19.309±0.00 5.457±5.05 13.493±8.04 8.562±0.00 6.738±3.85 3.831±2.46 16.344±7.56 18.384±1.97 8.708±5.63
ENST00000374454 2.244±0.00 4.251±0.00 N/A 6.506±0.00 3.149±0.00 N/A 2.336±0.00 2.070±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130055 ENST00000374382 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A 0.509±0.00 0.680±0.28 1.035±0.00
ENST00000453994 0.023±0.00 N/A N/A 0.164±0.00 N/A 0.059±0.03 N/A N/A 0.022±0.00 N/A N/A 0.064±0.00 N/A N/A
ENST00000472623 N/A N/A N/A 0.414±0.00 N/A 0.038±0.00 0.071±0.02 N/A 0.076±0.00 N/A N/A 0.193±0.13 0.134±0.00 N/A
ENST00000536730 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A
ENST00000538649 N/A N/A 0.243±0.00 N/A N/A N/A N/A N/A 0.010±0.00 N/A 0.032±0.00 0.081±0.07 N/A N/A
ENSG00000201377 ENST00000364507 N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015668 ENSMUST00000015812 2.612±0.00 N/A N/A N/A N/A N/A 1.854±0.77 7.602±0.00 2.212±0.00 N/A 0.729±0.10 N/A 5.595±0.00 1.175±0.00
ENSMUST00000059099 11.716±2.79 2.815±0.48 15.862±2.24 17.226±1.67 4.599±1.01 5.058±0.81 5.988±1.08 9.560±1.42 12.249±10.09 7.515±0.68 5.138±1.09 9.388±9.04 33.619±8.41 2.268±0.49
ENSMUST00000144643 N/A N/A N/A N/A N/A N/A N/A N/A 0.960±0.00 N/A 0.634±0.00 3.302±0.00 N/A N/A
ENSMUST00000151548 N/A N/A N/A N/A 4.958±3.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000019359 ENSMUST00000019503 0.184±0.00 0.287±0.00 N/A 2.691±1.88 0.378±0.03 0.710±0.01 N/A 0.322±0.19 0.089±0.02 1.098±0.25 N/A 5.403±3.37 0.191±0.18 0.185±0.17
ENSMUST00000113744 0.049±0.00 0.347±0.05 0.018±0.00 1.316±0.00 0.052±0.02 0.545±0.10 0.035±0.03 0.481±0.00 0.069±0.00 1.209±0.49 0.113±0.00 3.935±1.22 0.414±0.44 N/A
ENSMUST00000144912 N/A 0.390±0.00 N/A N/A 0.897±0.18 N/A N/A N/A 0.201±0.06 N/A N/A N/A N/A N/A
ENSMUST00000151572 N/A N/A N/A N/A 0.290±0.21 N/A 0.051±0.01 N/A 0.040±0.00 N/A 0.039±0.00 N/A N/A 0.227±0.00
ENSMUST00000156336 0.032±0.01 0.042±0.00 0.035±0.00 2.719±0.00 0.052±0.00 0.156±0.08 0.033±0.00 N/A 0.015±0.00 N/A N/A 2.586±0.19 0.016±0.00 0.067±0.00
ENSMUSG00000034311 ENSMUST00000048962 0.930±0.02 0.611±0.08 N/A 2.678±1.79 0.258±0.02 1.395±0.22 N/A N/A 9.065±3.39 0.445±0.03 N/A 2.057±1.03 6.042±3.08 0.689±0.29
ENSMUST00000145319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085314 ENSMUST00000149206 N/A N/A 0.025±0.00 2.153±1.05 N/A N/A 0.058±0.00 0.130±0.02 0.061±0.03 N/A 0.036±0.01 3.304±0.31 0.220±0.24 0.023±0.00

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