C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphodiester phosphodiesterase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453994 GDPD2-201 ENSG00000130055 9606 + X:70423031-70433390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonLiverOvaryENST00000453994
Transcript ID Adipose Brain Colon Liver Ovary
ENST00000453994 0.023±0.00 0.164±0.00 0.059±0.03 0.022±0.00 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009H CIL_00009H_0001 CGP X:70290090-70433390
CIL_00009K CIL_00009K_0001 CGP X:70423031-70505490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0047394 IEA glycerophosphoinositol inositolphosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019503 Gdpd2-001 protein_coding Mus_musculus 0 1668
ENSMUST00000113744 Gdpd2-005 protein_coding Mus_musculus 0 1555
ENSMUST00000156336 Gdpd2-002 retained_intron Mus_musculus 0 431
ENSMUST00000151572 Gdpd2-003 retained_intron Mus_musculus 0 298
ENSMUST00000144912 Gdpd2-004 processed_transcript Mus_musculus 0 239

Loading