C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and calponin homology (CH) domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130224 LRCH2 9606 - X:115110616-115234072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317135 LRCH2-001 115110616-115234072 protein_coding
  ENST00000538422 LRCH2-201 115110626-115234072 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317135ENST00000538422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317135 1.258±0.00 0.932±0.00 0.154±0.00 1.600±0.00 1.023±0.40 1.420±0.98 0.308±0.03 0.466±0.29 5.042±0.00 1.737±0.00 N/A 1.283±0.67 0.979±0.54 1.962±0.23
ENST00000538422 N/A N/A N/A N/A 0.356±0.00 N/A N/A N/A 0.010±0.00 0.357±0.00 0.099±0.08 0.154±0.00 0.200±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000178 CIL_000178_0002 CGP X:115003975-115234072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075580 lrch2 leucine-rich repeats and calponin homology (CH) domain containing 2 protein_coding Danio_rerio
ENSMUSG00000031290 Lrch2 leucine-rich repeats and calponin homology (CH) domain containing 2 protein_coding Mus_musculus

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