C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calmodulin regulated spectrin-associated protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130559 CAMSAP1 9606 - 9:135808487-135907228 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312405 CAMSAP1-010 135809581-135882897 protein_coding
  ENST00000389532 CAMSAP1-001 135808487-135907224 protein_coding
  ENST00000409386 CAMSAP1-002 135810490-135907228 protein_coding
  ENST00000460094 CAMSAP1-006 135866379-135882866 processed_transcript
  ENST00000468150 CAMSAP1-009 135865248-135881718 processed_transcript
  ENST00000482664 CAMSAP1-005 135811513-135818647 retained_intron
  ENST00000483991 CAMSAP1-008 135810423-135826409 processed_transcript
  ENST00000487868 CAMSAP1-004 135811515-135818171 retained_intron
  ENST00000492174 CAMSAP1-007 135849857-135862561 processed_transcript
  ENST00000493088 CAMSAP1-003 135817788-135819066 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312405ENST00000389532ENST00000409386ENST00000483991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312405 1.323±0.00 1.047±0.00 0.465±0.00 2.333±1.00 1.523±0.60 1.121±0.49 0.774±0.28 1.033±0.10 0.599±0.00 1.622±0.00 2.779±0.73 1.349±0.64 1.401±0.49 5.827±1.64
ENST00000389532 1.145±0.00 1.074±0.00 N/A 1.948±0.00 1.534±0.00 1.076±0.47 1.194±0.00 0.779±0.50 0.306±0.00 1.118±0.00 1.976±1.03 3.596±1.96 0.656±0.00 2.308±0.94
ENST00000409386 N/A N/A 0.267±0.00 2.383±0.00 1.307±0.00 N/A 1.072±0.31 N/A 0.590±0.00 2.028±0.00 5.084±4.26 1.800±0.19 0.997±0.21 3.115±0.73
ENST00000483991 0.708±0.00 N/A N/A N/A N/A N/A 0.982±0.00 N/A 0.389±0.00 1.118±0.00 N/A N/A N/A 5.042±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EV CIL_0001EV_0001 CGP 9:135702185-135907228
CIL_0001F1 CIL_0001F1_0001 CGP 9:135808487-135961380

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005516 ISS calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005874 IDA microtubule
GO:0007010 IMP cytoskeleton organization
GO:0008017 IDA:IEA microtubule binding
GO:0022604 IMP regulation of cell morphogenesis
GO:0030507 IDA spectrin binding
GO:0031175 IMP neuron projection development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019208 camsap1a calmodulin regulated spectrin-associated protein 1a protein_coding Danio_rerio
ENSDARG00000035122 camsap1b calmodulin regulated spectrin-associated protein 1b protein_coding Danio_rerio
ENSMUSG00000026933 Camsap1 calmodulin regulated spectrin-associated protein 1 protein_coding Mus_musculus

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