C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001F1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130559-ENSG00000130560 CGP 9606 9:135808487-135961380
GeneTranscriptPositionBiotype
ENSG00000130559 (CAMSAP1)
calmodulin regulated spectrin-associated protein 1 		ENST00000312405 (CAMSAP1-010) 135809581-135882897 protein_coding
ENST00000389532 (CAMSAP1-001) 135808487-135907224 protein_coding
ENST00000409386 (CAMSAP1-002) 135810490-135907228 protein_coding
ENST00000460094 (CAMSAP1-006) 135866379-135882866 processed_transcript
ENST00000468150 (CAMSAP1-009) 135865248-135881718 processed_transcript
ENST00000482664 (CAMSAP1-005) 135811513-135818647 retained_intron
ENST00000483991 (CAMSAP1-008) 135810423-135826409 processed_transcript
ENST00000487868 (CAMSAP1-004) 135811515-135818171 retained_intron
ENST00000492174 (CAMSAP1-007) 135849857-135862561 processed_transcript
ENST00000493088 (CAMSAP1-003) 135817788-135819066 processed_transcript
ENSG00000130560 (UBAC1)
UBA domain containing 1 		ENST00000371756 (UBAC1-001) 135932969-135961380 protein_coding
ENST00000465873 (UBAC1-005) 135938340-135945673 processed_transcript
ENST00000471163 (UBAC1-003) 135939732-135948044 processed_transcript
ENST00000478485 (UBAC1-004) 135947516-135961212 processed_transcript
ENST00000486258 (UBAC1-002) 135947877-135953893 processed_transcript
ENST00000489050 (UBAC1-006) 135933042-135945063 processed_transcript
ENSG00000238058 (RP11-432J22.2)
 ENST00000423793 (RP11-432J22.2-001) 135907812-135913513 antisense
CIL_0001F1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026933-ENSMUSG00000036352 CGP 10090 2:25926838-26021747
GeneTranscriptPositionBiotype
ENSMUSG00000026933 (Camsap1)
calmodulin regulated spectrin-associated protein 1 		ENSMUST00000091268 (Camsap1-201) 25926838-25983282 protein_coding
ENSMUST00000114167 (Camsap1-001) 25926838-25983282 protein_coding
ENSMUST00000127823 (Camsap1-005) 25965744-25983056 protein_coding
ENSMUST00000134054 (Camsap1-006) 25945013-25966896 protein_coding
ENSMUST00000134882 (Camsap1-002) 25938540-25983061 protein_coding
ENSMUST00000134970 (Camsap1-010) 25929932-25935561 processed_transcript
ENSMUST00000139937 (Camsap1-004) 25956250-25983208 nonsense_mediated_decay
ENSMUST00000142028 (Camsap1-007) 25945206-25966804 protein_coding
ENSMUST00000143977 (Camsap1-003) 25928531-25966767 nonsense_mediated_decay
ENSMUST00000148146 (Camsap1-009) 25929943-25934614 processed_transcript
ENSMUST00000151593 (Camsap1-008) 25945032-25965750 protein_coding
ENSMUST00000183461 (Camsap1-202) 25929726-25983282 protein_coding
ENSMUSG00000036352 (Ubac1)
ubiquitin associated domain containing 1 		ENSMUST00000036509 (Ubac1-001) 25998543-26021747 protein_coding
ENSMUST00000123275 (Ubac1-002) 25998543-26007920 processed_transcript
ENSMUST00000134990 (Ubac1-006) 26010535-26017478 processed_transcript
ENSMUST00000136750 (Ubac1-005) 26006527-26021532 protein_coding
ENSMUST00000146363 (Ubac1-007) 26005404-26016312 protein_coding
ENSMUST00000146898 (Ubac1-004) 26014912-26021566 processed_transcript
ENSMUST00000148725 (Ubac1-008) 26008895-26010953 processed_transcript
ENSMUST00000150608 (Ubac1-003) 26015965-26021602 processed_transcript
ENSMUST00000154336 (Ubac1-009) 25998806-26009223 processed_transcript
ENSMUSG00000082357 (Gm13542)
predicted gene 13542 		ENSMUST00000118484 (Gm13542-001) 25994547-25995183 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001F1_0001ENSG00000130559ENST00000312405ENST00000389532ENST00000409386ENST00000460094ENST00000468150ENST00000482664ENST00000483991ENST00000487868ENST00000492174ENST00000493088ENSG00000130560ENST00000371756ENST00000465873ENST00000471163ENST00000478485ENST00000486258ENST00000489050ENSG00000238058ENST00000423793CIL_0001F1_0002ENSMUSG00000026933ENSMUST00000091268ENSMUST00000114167ENSMUST00000127823ENSMUST00000134054ENSMUST00000134882ENSMUST00000134970ENSMUST00000139937ENSMUST00000142028ENSMUST00000143977ENSMUST00000148146ENSMUST00000151593ENSMUST00000183461ENSMUSG00000036352ENSMUST00000036509ENSMUST00000123275ENSMUST00000134990ENSMUST00000136750ENSMUST00000146363ENSMUST00000146898ENSMUST00000148725ENSMUST00000150608ENSMUST00000154336ENSMUSG00000082357ENSMUST00000118484
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001F1_0001ENSG00000130559ENST00000312405ENST00000389532ENST00000409386ENST00000483991ENSG00000130560ENST00000371756ENST00000471163ENST00000478485ENSG00000238058ENST00000423793CIL_0001F1_0002ENSMUSG00000026933ENSMUST00000091268ENSMUST00000114167ENSMUST00000134882ENSMUST00000143977ENSMUST00000183461ENSMUSG00000036352ENSMUST00000036509ENSMUST00000123275ENSMUST00000136750ENSMUST00000146363ENSMUST00000154336ENSMUSG00000082357ENSMUST00000118484
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130559 ENST00000312405 1.323±0.00 1.047±0.00 0.465±0.00 2.333±1.00 1.523±0.60 1.121±0.49 0.774±0.28 1.033±0.10 0.599±0.00 1.622±0.00 2.779±0.73 1.349±0.64 1.401±0.49 5.827±1.64
ENST00000389532 1.145±0.00 1.074±0.00 N/A 1.948±0.00 1.534±0.00 1.076±0.47 1.194±0.00 0.779±0.50 0.306±0.00 1.118±0.00 1.976±1.03 3.596±1.96 0.656±0.00 2.308±0.94
ENST00000409386 N/A N/A 0.267±0.00 2.383±0.00 1.307±0.00 N/A 1.072±0.31 N/A 0.590±0.00 2.028±0.00 5.084±4.26 1.800±0.19 0.997±0.21 3.115±0.73
ENST00000460094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483991 0.708±0.00 N/A N/A N/A N/A N/A 0.982±0.00 N/A 0.389±0.00 1.118±0.00 N/A N/A N/A 5.042±1.61
ENST00000487868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130560 ENST00000371756 11.200±0.00 10.945±0.00 1.018±0.00 11.898±5.86 9.071±6.40 12.951±8.72 16.614±13.25 12.498±8.46 6.176±3.04 8.771±8.30 75.240±56.77 19.754±10.27 28.213±7.62 34.616±3.37
ENST00000465873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471163 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.024±0.00 7.502±0.00 59.968±0.00 101.760±0.00 118.419±0.00
ENST00000478485 N/A N/A N/A N/A N/A N/A N/A N/A 1.906±0.00 0.763±0.00 N/A N/A N/A N/A
ENST00000486258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238058 ENST00000423793 N/A 0.620±0.00 N/A 1.767±0.00 N/A 0.396±0.24 0.891±0.00 0.675±0.00 0.281±0.00 N/A N/A N/A 0.635±0.00 2.567±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026933 ENSMUST00000091268 N/A N/A N/A N/A 0.430±0.00 N/A 0.491±0.08 0.492±0.00 N/A N/A N/A 0.785±0.00 N/A N/A
ENSMUST00000114167 0.617±0.26 0.380±0.05 1.059±0.16 8.214±5.79 1.120±0.02 0.443±0.14 1.461±0.29 1.034±0.35 0.912±0.44 1.308±0.30 2.431±0.85 1.005±0.42 1.171±0.45 14.752±1.27
ENSMUST00000127823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134882 1.651±0.00 2.234±0.71 N/A N/A 1.086±0.11 1.116±0.00 N/A 0.838±0.00 0.456±0.05 1.401±0.63 N/A 2.763±0.63 N/A 11.005±1.20
ENSMUST00000134970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143977 1.314±0.55 0.895±0.32 1.073±0.00 8.976±5.26 0.668±0.17 0.964±0.37 0.633±0.16 0.775±0.18 0.925±0.55 1.039±0.38 1.944±0.65 4.697±3.01 3.196±1.58 17.038±2.42
ENSMUST00000148146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183461 N/A N/A N/A 14.983±0.00 N/A N/A N/A N/A N/A N/A N/A 4.027±2.48 2.942±1.52 31.630±34.75
ENSMUSG00000036352 ENSMUST00000036509 22.689±2.92 18.051±5.13 21.233±2.55 28.566±3.08 19.398±4.53 18.662±2.89 30.933±3.70 21.524±1.91 86.195±95.16 10.486±2.31 95.120±4.35 15.150±2.40 22.580±3.42 31.778±2.95
ENSMUST00000123275 N/A 14.557±0.00 N/A 9.903±0.00 19.707±9.51 N/A 12.292±0.63 9.098±0.64 3.200±0.46 N/A N/A 11.462±3.81 16.909±5.47 11.916±0.00
ENSMUST00000134990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136750 N/A N/A N/A 16.954±0.00 N/A N/A N/A N/A N/A N/A N/A 19.422±0.00 23.946±7.62 22.483±0.00
ENSMUST00000146363 N/A N/A N/A 23.924±0.00 N/A N/A N/A N/A N/A N/A N/A 28.019±0.00 37.813±16.34 49.348±0.00
ENSMUST00000146898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154336 N/A N/A N/A 6.365±0.00 12.997±0.00 11.154±0.90 N/A N/A N/A N/A N/A 7.231±0.00 7.193±0.00 N/A
ENSMUSG00000082357 ENSMUST00000118484 0.090±0.01 N/A 0.101±0.01 0.296±0.09 0.309±0.00 0.242±0.07 0.163±0.03 0.123±0.05 0.230±0.16 0.165±0.07 0.242±0.09 0.287±0.10 0.079±0.02 0.074±0.01

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