C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin regulated spectrin-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409386 CAMSAP1-002 ENSG00000130559 9606 - 9:135810490-135907228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000409386
Transcript ID Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000409386 0.267±0.00 2.383±0.00 1.307±0.00 1.072±0.31 0.590±0.00 2.028±0.00 5.084±4.26 1.800±0.19 0.997±0.21 3.115±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EV CIL_0001EV_0001 CGP 9:135702185-135907228
CIL_0001F1 CIL_0001F1_0001 CGP 9:135808487-135961380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005516 ISS calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005874 IDA microtubule
GO:0007010 IMP cytoskeleton organization
GO:0008017 IDA:IEA microtubule binding
GO:0022604 IMP regulation of cell morphogenesis
GO:0030507 IDA spectrin binding
GO:0031175 IMP neuron projection development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114167 Camsap1-001 protein_coding Mus_musculus 0 3131
ENSMUST00000091268 Camsap1-201 protein_coding Mus_musculus 0 3112
ENSMUST00000183461 Camsap1-202 protein_coding Mus_musculus 0 3109
ENSMUST00000143977 Camsap1-003 nonsense_mediated_decay Mus_musculus 0 2904
ENSMUST00000134882 Camsap1-002 protein_coding Mus_musculus 0 2599
ENSMUST00000134054 Camsap1-006 protein_coding Mus_musculus 0 1014
ENSDART00000082776 camsap1b-201 protein_coding Danio_rerio 0 603
ENSDART00000147707 camsap1b-001 protein_coding Danio_rerio 0 603
ENSMUST00000127823 Camsap1-005 protein_coding Mus_musculus 0 466
ENSMUST00000142028 Camsap1-007 protein_coding Mus_musculus 0 368
ENSMUST00000139937 Camsap1-004 nonsense_mediated_decay Mus_musculus 0 351
ENSMUST00000151593 Camsap1-008 protein_coding Mus_musculus 0 320
ENSMUST00000134970 Camsap1-010 processed_transcript Mus_musculus 0 267

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