C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline-rich coiled-coil 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130723 PRRC2B 9606 + 9:131394093-131500197 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320547 PRRC2B-005 131487292-131500197 protein_coding
  ENST00000357304 PRRC2B-201 131430090-131500171 protein_coding
  ENST00000405995 PRRC2B-001 131394093-131500197 protein_coding
  ENST00000422467 PRRC2B-003 131455143-131470791 protein_coding
  ENST00000451855 PRRC2B-004 131475930-131484790 protein_coding
  ENST00000456307 PRRC2B-002 131473594-131474847 protein_coding
  ENST00000458550 PRRC2B-202 131485092-131495874 protein_coding
  ENST00000465931 PRRC2B-006 131490765-131500197 processed_transcript
  ENST00000489593 PRRC2B-007 131446505-131448198 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357304ENST00000405995ENST00000458550ENST00000489593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357304 13.436±0.00 8.610±0.00 1.111±0.00 2.291±0.00 11.215±0.00 10.850±0.00 1.097±0.00 0.580±0.00 3.982±1.01 N/A N/A 2.987±1.81 5.348±0.00 7.363±1.74
ENST00000405995 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.202±0.00 0.600±0.00 2.287±0.72 4.030±0.00 2.675±0.00
ENST00000458550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.902±0.00 N/A N/A N/A
ENST00000489593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.590±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0001 VISTA 9:131030990-131632063
CIL_0002ED CIL_0002ED_0002 CGP 9:131289694-131500197
CIL_0006ID CIL_0006ID_0001 CGP 9:131394093-131523806

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079639 PRRC2B proline-rich coiled-coil 2B protein_coding Danio_rerio
ENSMUSG00000039262 Prrc2b proline-rich coiled-coil 2B protein_coding Mus_musculus

Loading