C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline-rich coiled-coil 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039262 Prrc2b 10090 + 2:32151082-32234537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036691 Prrc2b-001 32151082-32234537 protein_coding
  ENSMUST00000069817 Prrc2b-201 32151148-32234536 protein_coding
  ENSMUST00000123270 Prrc2b-004 32206383-32219658 processed_transcript
  ENSMUST00000128936 Prrc2b-006 32216078-32219612 protein_coding
  ENSMUST00000129626 Prrc2b-009 32219530-32222319 processed_transcript
  ENSMUST00000132459 Prrc2b-002 32183226-32231162 protein_coding
  ENSMUST00000137551 Prrc2b-003 32208694-32234516 protein_coding
  ENSMUST00000140015 Prrc2b-008 32217280-32221367 processed_transcript
  ENSMUST00000141053 Prrc2b-010 32219768-32221435 processed_transcript
  ENSMUST00000142219 Prrc2b-007 32217212-32219156 processed_transcript
  ENSMUST00000156313 Prrc2b-005 32212198-32219317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036691ENSMUST00000069817ENSMUST00000132459ENSMUST00000137551ENSMUST00000140015
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036691 12.726±3.63 13.904±4.03 6.059±2.80 26.917±6.91 13.054±1.29 9.436±1.20 8.922±0.74 13.087±0.50 3.997±1.93 20.837±1.58 5.127±0.08 21.180±7.35 9.208±1.98 0.708±0.30
ENSMUST00000069817 N/A N/A N/A 31.564±15.16 3.021±0.00 4.114±0.00 1.616±0.00 N/A 1.206±0.22 N/A 17.718±3.47 11.238±5.79 7.308±2.62 0.716±0.04
ENSMUST00000132459 N/A 14.565±3.02 N/A N/A 7.179±0.00 5.253±0.31 N/A N/A 2.255±0.53 6.907±0.00 N/A N/A 9.355±1.11 1.147±0.00
ENSMUST00000137551 9.259±2.10 15.445±3.92 6.897±1.63 20.301±4.16 10.216±2.11 5.023±0.71 7.449±1.26 6.150±0.31 1.769±0.50 12.655±0.96 5.730±0.47 14.011±3.25 4.260±0.26 0.648±0.07
ENSMUST00000140015 N/A N/A N/A 273.236±0.00 N/A N/A N/A N/A N/A N/A N/A 121.693±0.00 71.991±19.17 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0002ED CIL_0002ED_0003 CGP 2:32095528-32234537
CIL_0006ID CIL_0006ID_0002 CGP 2:32151082-32255005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079639 PRRC2B proline-rich coiled-coil 2B protein_coding Danio_rerio
ENSG00000130723 PRRC2B proline-rich coiled-coil 2B protein_coding Homo_sapiens

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