C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Yip1 domain family, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130733 YIPF2 9606 - 19:10922185-10928681 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253031 YIPF2-001 10922185-10928681 protein_coding
  ENST00000585858 YIPF2-003 10923837-10928650 protein_coding
  ENST00000586575 YIPF2-012 10923352-10928657 protein_coding
  ENST00000586748 YIPF2-002 10922768-10928653 protein_coding
  ENST00000587943 YIPF2-004 10923496-10928625 protein_coding
  ENST00000588347 YIPF2-006 10923833-10928512 protein_coding
  ENST00000588962 YIPF2-011 10923842-10928550 retained_intron
  ENST00000589971 YIPF2-009 10922835-10924147 protein_coding
  ENST00000590329 YIPF2-007 10923272-10928585 protein_coding
  ENST00000591872 YIPF2-008 10923101-10923617 protein_coding
  ENST00000592505 YIPF2-005 10927598-10928547 retained_intron
  ENST00000592646 YIPF2-010 10922770-10924117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253031ENST00000585858ENST00000586748ENST00000589971ENST00000592646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253031 25.513±0.00 24.005±0.00 1.168±0.00 9.747±5.67 12.544±10.04 11.808±9.81 5.219±4.31 29.563±0.00 10.367±7.85 13.979±10.54 17.645±14.24 22.174±12.29 52.012±16.73 40.569±0.53
ENST00000585858 N/A N/A 1.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586748 N/A N/A N/A N/A 1.543±0.00 N/A N/A 1.409±0.00 N/A N/A N/A 3.248±0.00 17.196±0.00 N/A
ENST00000589971 N/A N/A N/A N/A N/A N/A N/A 2.778±0.00 N/A N/A N/A N/A N/A N/A
ENST00000592646 N/A N/A 1.475±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S5 CIL_0002S5_0001 CGP 19:10836575-10923070
CIL_0004ZT CIL_0004ZT_0002 CGP 19:10871513-10928681
CIL_0004ZU CIL_0004ZU_0002 CGP 19:10922185-10933535

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030133 IDA transport vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021399 yipf2 Yip1 domain family, member 2 protein_coding Danio_rerio
ENSMUSG00000032182 Yipf2 Yip1 domain family, member 2 protein_coding Mus_musculus

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