C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin tyrosine ligase-like family, member 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131044 TTLL9 9606 + 20:31870702-31944963 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310998 TTLL9-004 31870759-31944199 nonsense_mediated_decay
  ENST00000375921 TTLL9-002 31870711-31944959 nonsense_mediated_decay
  ENST00000375922 TTLL9-003 31870759-31944199 nonsense_mediated_decay
  ENST00000375934 TTLL9-006 31879829-31943007 nonsense_mediated_decay
  ENST00000375938 TTLL9-001 31870702-31944961 protein_coding
  ENST00000535842 TTLL9-201 31871127-31944962 protein_coding
  ENST00000611624 TTLL9-007 31879806-31943358 nonsense_mediated_decay
  ENST00000612972 TTLL9-008 31937470-31943928 protein_coding
  ENST00000616761 TTLL9-009 31879837-31943398 nonsense_mediated_decay
  ENST00000619753 TTLL9-010 31933800-31941231 nonsense_mediated_decay
  ENST00000620043 TTLL9-005 31879817-31944963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLiverLungOvaryENST00000611624ENST00000619753
Transcript ID Bladder Heart Liver Lung Ovary
ENST00000611624 0.164±0.00 N/A N/A 0.492±0.00 N/A
ENST00000619753 N/A 0.159±0.00 0.125±0.00 0.196±0.00 0.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0001AA CIL_0001AA_0001 CGP 20:31844301-31870747
CIL_0001AB CIL_0001AB_0001 CGP 20:31847637-31944963
CIL_0001KI CIL_0001KI_0001 CGP 20:31870702-31952092

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0005929 IEA cilium
GO:0006464 IEA cellular protein modification process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062806 ttll9 tubulin tyrosine ligase-like family, member 9 protein_coding Danio_rerio
ENSMUSG00000074673 Ttll9 tubulin tyrosine ligase-like family, member 9 protein_coding Mus_musculus

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