C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131044-ENSG00000088356 CGP 9606 20:31870702-31952092
GeneTranscriptPositionBiotype
ENSG00000088356 (PDRG1)
p53 and DNA-damage regulated 1 		ENST00000202017 (PDRG1-001) 31944342-31952092 protein_coding
ENSG00000199497 (RNU1-94P)
RNA, U1 small nuclear 94, pseudogene 		ENST00000362627 (RNU1-94P-201) 31901254-31901426 snRNA
CIL_0001KI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074673-ENSMUSG00000027472 CGP 10090 2:152962485-153015427
GeneTranscriptPositionBiotype
ENSMUSG00000027472 (Pdrg1)
p53 and DNA damage regulated 1 		ENSMUST00000028972 (Pdrg1-001) 153008890-153015427 protein_coding
ENSMUST00000123083 (Pdrg1-005) 153012383-153015362 nonsense_mediated_decay
ENSMUST00000124220 (Pdrg1-004) 153013351-153015377 retained_intron
ENSMUST00000140325 (Pdrg1-006) 153014015-153015342 processed_transcript
ENSMUST00000140853 (Pdrg1-002) 153010293-153015366 nonsense_mediated_decay
ENSMUST00000150545 (Pdrg1-003) 153008890-153015427 nonsense_mediated_decay
ENSMUST00000151392 (Pdrg1-008) 153009470-153012490 retained_intron
ENSMUST00000152072 (Pdrg1-007) 153012213-153015346 retained_intron
ENSMUSG00000074673 (Ttll9)
tubulin tyrosine ligase-like family, member 9 		ENSMUST00000099197 (Ttll9-001) 152962485-153007340 protein_coding
ENSMUST00000103155 (Ttll9-002) 152962506-153003230 protein_coding
ENSMUST00000109801 (Ttll9-010) 152962511-153006971 nonsense_mediated_decay
ENSMUST00000146626 (Ttll9-008) 152962506-153003186 nonsense_mediated_decay
ENSMUST00000150218 (Ttll9-006) 153002781-153008482 retained_intron
ENSMUST00000151641 (Ttll9-005) 152989459-152999325 retained_intron
ENSMUST00000152158 (Ttll9-007) 152962506-153003179 nonsense_mediated_decay
ENSMUST00000155631 (Ttll9-003) 152973568-152984321 protein_coding
ENSMUST00000165343 (Ttll9-009) 152972288-153007340 nonsense_mediated_decay
ENSMUSG00000089898 (Gm14199)
predicted gene 14199 		ENSMUST00000130021 (Gm14199-001) 152990017-152991631 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KI_0001ENSG00000088356ENST00000202017ENSG00000199497ENST00000362627CIL_0001KI_0002ENSMUSG00000027472ENSMUST00000028972ENSMUST00000123083ENSMUST00000124220ENSMUST00000140325ENSMUST00000140853ENSMUST00000150545ENSMUST00000151392ENSMUST00000152072ENSMUSG00000074673ENSMUST00000099197ENSMUST00000103155ENSMUST00000109801ENSMUST00000146626ENSMUST00000150218ENSMUST00000151641ENSMUST00000152158ENSMUST00000155631ENSMUST00000165343ENSMUSG00000089898ENSMUST00000130021
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KI_0001ENSG00000088356ENST00000202017ENSG00000199497ENST00000362627CIL_0001KI_0002ENSMUSG00000027472ENSMUST00000028972ENSMUST00000123083ENSMUST00000150545ENSMUST00000151392ENSMUST00000152072ENSMUSG00000074673ENSMUST00000099197ENSMUST00000103155ENSMUST00000109801ENSMUST00000146626ENSMUST00000150218ENSMUST00000151641ENSMUST00000152158ENSMUST00000155631ENSMUST00000165343ENSMUSG00000089898ENSMUST00000130021
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088356 ENST00000202017 2.563±0.00 6.636±0.00 0.444±0.00 4.455±3.14 2.396±1.55 3.117±2.70 1.581±1.50 4.576±4.27 1.843±1.59 3.452±3.31 1.028±0.56 9.388±7.09 9.440±1.83 34.941±12.09
ENSG00000199497 ENST00000362627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.476±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027472 ENSMUST00000028972 43.140±6.07 42.577±7.24 42.534±6.86 35.352±17.48 34.874±11.23 15.227±3.75 62.691±2.44 29.100±7.44 17.977±4.99 29.039±3.12 49.999±3.76 34.629±8.77 20.453±4.78 7.525±3.41
ENSMUST00000123083 N/A N/A N/A 42.282±0.00 N/A N/A N/A N/A N/A N/A N/A 112.238±0.00 N/A N/A
ENSMUST00000124220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.817±0.00
ENSMUST00000151392 N/A N/A N/A 11.947±0.00 N/A N/A N/A N/A N/A N/A N/A 36.145±6.48 N/A 5.434±0.00
ENSMUST00000152072 N/A N/A N/A 20.328±0.00 N/A N/A N/A N/A N/A N/A N/A 71.593±0.00 61.378±16.21 6.088±0.00
ENSMUSG00000074673 ENSMUST00000099197 0.054±0.03 N/A 0.009±0.00 0.657±0.17 N/A N/A N/A 0.175±0.06 0.061±0.02 0.522±0.23 N/A 0.781±0.35 N/A 77.278±33.71
ENSMUST00000103155 N/A N/A N/A 0.312±0.00 N/A N/A N/A 0.080±0.00 N/A 0.402±0.04 N/A 0.640±0.21 N/A 30.741±0.00
ENSMUST00000109801 N/A N/A N/A N/A 0.170±0.00 N/A 0.026±0.00 N/A 0.039±0.00 0.479±0.00 N/A N/A N/A N/A
ENSMUST00000146626 0.088±0.00 N/A 0.012±0.00 0.432±0.10 N/A N/A 0.155±0.00 N/A 0.055±0.02 N/A 0.028±0.00 0.777±0.00 N/A 13.107±0.00
ENSMUST00000150218 0.033±0.01 0.136±0.08 0.035±0.00 0.499±0.03 0.046±0.01 0.047±0.02 0.034±0.00 0.045±0.01 0.045±0.03 N/A 0.021±0.01 0.248±0.03 0.025±0.01 N/A
ENSMUST00000151641 0.172±0.08 N/A N/A N/A N/A N/A N/A 0.219±0.00 0.095±0.04 N/A N/A N/A N/A N/A
ENSMUST00000152158 N/A N/A N/A N/A N/A N/A 0.132±0.00 0.080±0.00 N/A N/A N/A N/A N/A 9.162±0.00
ENSMUST00000155631 N/A N/A N/A N/A N/A N/A N/A 0.558±0.06 N/A N/A 0.136±0.00 2.184±0.89 0.203±0.00 N/A
ENSMUST00000165343 N/A 0.176±0.00 0.013±0.00 0.716±0.00 0.066±0.03 N/A 0.294±0.00 0.292±0.12 0.038±0.01 0.680±0.06 0.025±0.00 0.769±0.33 0.006±0.00 N/A
ENSMUSG00000089898 ENSMUST00000130021 N/A N/A N/A N/A 0.273±0.21 0.122±0.01 N/A 0.176±0.00 0.090±0.00 N/A N/A N/A 0.131±0.00 N/A

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