C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tubulin tyrosine ligase-like family, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310998 TTLL9-004 ENSG00000131044 9606 + 20:31870759-31944199 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0001AA CIL_0001AA_0001 CGP 20:31844301-31870747
CIL_0001AB CIL_0001AB_0001 CGP 20:31847637-31944963
CIL_0001KI CIL_0001KI_0001 CGP 20:31870702-31952092

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109801 Ttll9-010 nonsense_mediated_decay Mus_musculus 0 551
ENSMUST00000103155 Ttll9-002 protein_coding Mus_musculus 0 551
ENSMUST00000099197 Ttll9-001 protein_coding Mus_musculus 0 551
ENSMUST00000155631 Ttll9-003 protein_coding Mus_musculus 0 496
ENSMUST00000152158 Ttll9-007 nonsense_mediated_decay Mus_musculus 0 300
ENSMUST00000146626 Ttll9-008 nonsense_mediated_decay Mus_musculus 0 248
ENSMUST00000165343 Ttll9-009 nonsense_mediated_decay Mus_musculus 6e-37 159

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