C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Gse1 coiled-coil protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131149 GSE1 9606 + 16:85611409-85676204 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253458 GSE1-002 85613216-85676204 protein_coding
  ENST00000393243 GSE1-001 85613352-85676204 protein_coding
  ENST00000405402 GSE1-003 85611409-85673354 protein_coding
  ENST00000411612 GSE1-006 85613157-85655872 protein_coding
  ENST00000412692 GSE1-005 85654432-85676204 protein_coding
  ENST00000438180 GSE1-011 85663366-85672893 protein_coding
  ENST00000469381 GSE1-004 85662291-85676204 retained_intron
  ENST00000471070 GSE1-010 85671831-85672648 processed_transcript
  ENST00000479488 GSE1-007 85661490-85663353 retained_intron
  ENST00000495192 GSE1-008 85664540-85666004 retained_intron
  ENST00000496345 GSE1-009 85670628-85672496 retained_intron
  ENST00000562659 GSE1-012 85665020-85666622 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253458ENST00000393243ENST00000405402ENST00000412692ENST00000438180ENST00000469381
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253458 10.483±0.00 3.512±0.00 1.091±0.00 13.681±0.00 5.329±0.00 3.664±0.00 2.317±0.10 0.578±0.00 1.767±0.09 3.617±1.31 8.738±8.10 2.555±0.30 2.801±0.00
ENST00000393243 2.781±0.00 2.152±0.00 0.639±0.00 2.848±1.96 N/A N/A 2.000±0.00 2.013±0.00 2.637±0.00 5.408±0.00 8.184±0.00 4.522±2.73 10.266±0.00
ENST00000405402 N/A N/A N/A 1.569±0.00 1.407±0.00 N/A N/A N/A 3.680±0.00 1.414±0.00 4.350±0.00 7.756±1.03 N/A
ENST00000412692 N/A N/A 1.973±0.00 N/A 1.166±0.00 1.113±0.83 1.921±0.00 0.753±0.00 1.990±0.00 3.549±0.00 3.356±0.68 10.462±0.00 7.720±0.00
ENST00000438180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.533±0.00 13.208±0.00 12.062±0.00
ENST00000469381 N/A N/A N/A N/A N/A N/A N/A 0.382±0.00 N/A N/A 0.743±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HO CIL_0008HO_0001 VISTA 16:85081508-85682988
CIL_0000IQ CIL_0000IQ_0001 CGP 16:85098358-85676204
CIL_0008HH CIL_0008HH_0001 VISTA 16:85286489-85888130
CIL_000579 CIL_000579_0002 CGP 16:85611409-85690073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062020 gse1 Gse1 coiled-coil protein protein_coding Danio_rerio
ENSMUSG00000031822 Gse1 genetic suppressor element 1 protein_coding Mus_musculus

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