C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Gse1 coiled-coil protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393243 GSE1-001 ENSG00000131149 9606 + 16:85613352-85676204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393243
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393243 2.781±0.00 2.152±0.00 0.639±0.00 2.848±1.96 2.000±0.00 2.013±0.00 2.637±0.00 5.408±0.00 8.184±0.00 4.522±2.73 10.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HO CIL_0008HO_0001 VISTA 16:85081508-85682988
CIL_0000IQ CIL_0000IQ_0001 CGP 16:85098358-85676204
CIL_0008HH CIL_0008HH_0001 VISTA 16:85286489-85888130
CIL_000579 CIL_000579_0002 CGP 16:85611409-85690073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118136 Gse1-001 protein_coding Mus_musculus 0 3663
ENSMUST00000120493 Gse1-003 protein_coding Mus_musculus 0 3663
ENSMUST00000034279 Gse1-002 protein_coding Mus_musculus 0 3663
ENSMUST00000147327 Gse1-004 retained_intron Mus_musculus 0 564
ENSMUST00000141113 Gse1-005 processed_transcript Mus_musculus 0 499
ENSMUST00000034278 Gins2-001 protein_coding Mus_musculus 0 311
ENSMUST00000146526 Gins2-002 retained_intron Mus_musculus 0 311

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