C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008HH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2 VISTA 9606 16:85286489-85888130
GeneTranscriptPositionBiotype
ENSG00000131143 (COX4I1)
cytochrome c oxidase subunit IV isoform 1
ENST00000253452 (COX4I1-001) 85799684-85807002 protein_coding
ENST00000561569 (COX4I1-009) 85799697-85807002 protein_coding
ENST00000562336 (COX4I1-016) 85799693-85807044 protein_coding
ENST00000562929 (COX4I1-017) 85805069-85807031 processed_transcript
ENST00000563774 (COX4I1-008) 85799696-85805350 retained_intron
ENST00000564544 (COX4I1-015) 85799708-85806975 nonsense_mediated_decay
ENST00000564648 (COX4I1-005) 85801202-85806967 retained_intron
ENST00000564903 (COX4I1-004) 85801202-85806968 protein_coding
ENST00000565078 (COX4I1-006) 85798633-85804992 protein_coding
ENST00000566115 (COX4I1-010) 85799638-85805096 nonsense_mediated_decay
ENST00000566405 (COX4I1-013) 85799698-85806802 protein_coding
ENST00000566617 (COX4I1-007) 85799760-85805309 retained_intron
ENST00000567241 (COX4I1-012) 85799654-85805328 retained_intron
ENST00000567266 (COX4I1-019) 85799697-85805426 retained_intron
ENST00000568339 (COX4I1-003) 85799622-85807002 retained_intron
ENST00000568794 (COX4I1-011) 85799683-85806805 protein_coding
ENST00000569997 (COX4I1-002) 85803057-85807002 retained_intron
ENST00000570123 (COX4I1-014) 85799612-85805742 processed_transcript
ENSG00000131148 (EMC8)
ER membrane protein complex subunit 8
ENST00000253457 (EMC8-001) 85778624-85799540 protein_coding
ENST00000435200 (EMC8-002) 85778624-85799608 protein_coding
ENST00000595980 (EMC8-003) 85771758-85781258 nonsense_mediated_decay
ENST00000596852 (EMC8-006) 85788897-85799396 retained_intron
ENST00000597291 (EMC8-005) 85779398-85781223 retained_intron
ENST00000600807 (EMC8-004) 85779662-85781760 retained_intron
ENSG00000131149 (GSE1)
Gse1 coiled-coil protein
ENST00000253458 (GSE1-002) 85613216-85676204 protein_coding
ENST00000393243 (GSE1-001) 85613352-85676204 protein_coding
ENST00000405402 (GSE1-003) 85611409-85673354 protein_coding
ENST00000411612 (GSE1-006) 85613157-85655872 protein_coding
ENST00000412692 (GSE1-005) 85654432-85676204 protein_coding
ENST00000438180 (GSE1-011) 85663366-85672893 protein_coding
ENST00000469381 (GSE1-004) 85662291-85676204 retained_intron
ENST00000471070 (GSE1-010) 85671831-85672648 processed_transcript
ENST00000479488 (GSE1-007) 85661490-85663353 retained_intron
ENST00000495192 (GSE1-008) 85664540-85666004 retained_intron
ENST00000496345 (GSE1-009) 85670628-85672496 retained_intron
ENST00000562659 (GSE1-012) 85665020-85666622 retained_intron
ENSG00000131153 (GINS2)
GINS complex subunit 2 (Psf2 homolog)
ENST00000253462 (GINS2-001) 85676198-85688999 protein_coding
ENST00000595355 (GINS2-003) 85678570-85688025 protein_coding
ENST00000596233 (GINS2-004) 85678623-85690073 protein_coding
ENSG00000154102 (C16orf74)
chromosome 16 open reading frame 74
ENST00000284245 (C16orf74-001) 85707517-85751091 protein_coding
ENST00000602583 (C16orf74-006) 85707517-85710850 protein_coding
ENST00000602675 (C16orf74-004) 85707517-85750951 protein_coding
ENST00000602719 (C16orf74-007) 85690170-85751129 protein_coding
ENST00000602758 (C16orf74-005) 85690084-85751010 processed_transcript
ENST00000602766 (C16orf74-002) 85707654-85751112 protein_coding
ENST00000602914 (C16orf74-003) 85707532-85751105 protein_coding
ENSG00000214259 (RP11-568J23.1)
ENST00000484096 (RP11-568J23.1-001) 85815873-85816536 processed_pseudogene
ENSG00000252311 (RNU1-103P)
RNA, U1 small nuclear 103, pseudogene
ENST00000516502 (RNU1-103P-201) 85781775-85781899 snRNA
ENSG00000260417 (CTD-2542L18.1)
ENST00000567093 (CTD-2542L18.1-001) 85592266-85595720 lincRNA
ENSG00000261567 (RP11-680G10.1)
ENST00000568080 (RP11-680G10.1-001) 85357463-85359449 lincRNA
ENSG00000263968 (RN7SL381P)
RNA, 7SL, cytoplasmic 381, pseudogene
ENST00000577658 (RN7SL381P-201) 85659378-85659675 misc_RNA
ENSG00000266307 (MIR5093)
microRNA 5093
ENST00000583199 (MIR5093-201) 85306226-85306325 miRNA
ENSG00000269898 (RP11-568J23.4)
ENST00000602789 (RP11-568J23.4-001) 85743287-85744225 antisense
ENSG00000270124 (RP11-118F19.1)
ENST00000602862 (RP11-118F19.1-001) 85580009-85583571 lincRNA
ENSG00000270159 (RP11-568J23.6)
ENST00000602617 (RP11-568J23.6-001) 85792415-85792933 antisense
ENSG00000270184 (RP11-568J23.5)
ENST00000602706 (RP11-568J23.5-001) 85784382-85787617 antisense
ENSG00000275393 (RP11-568J23.8)
ENST00000614011 (RP11-568J23.8-001) 85697335-85697868 sense_intronic
ENSG00000278716 (LA16c-352F7.1)
ENST00000620845 (LA16c-352F7.1-001) 85489813-85490831 lincRNA
ENSG00000279907 (RP11-568J23.2)
ENST00000624587 (RP11-568J23.2-001) 85859521-85862012 TEC
CIL_0008HH_0002 (Click to Hide/Show)
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Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
hs2 VISTA 10090 8:120216454-120817853
GeneTranscriptPositionBiotype

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008HH_0001ENSG00000131143ENST00000253452ENST00000562336ENST00000562929ENST00000566405ENST00000570123ENSG00000131148ENST00000253457ENSG00000131149ENST00000253458ENST00000393243ENST00000405402ENST00000412692ENST00000438180ENST00000469381ENSG00000131153ENST00000253462ENSG00000154102ENST00000284245ENST00000602583ENST00000602675ENST00000602719ENST00000602758ENST00000602766ENST00000602914ENSG00000214259ENST00000484096ENSG00000252311ENST00000516502ENSG00000260417ENST00000567093ENSG00000261567ENST00000568080ENSG00000263968ENST00000577658ENSG00000266307ENST00000583199ENSG00000269898ENST00000602789ENSG00000270124ENST00000602862ENSG00000270159ENST00000602617ENSG00000270184ENST00000602706ENSG00000275393ENST00000614011ENSG00000278716ENST00000620845ENSG00000279907ENST00000624587
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131143 ENST00000253452 175.899±0.00 362.417±0.00 20.510±0.00 180.707±86.54 147.899±131.19 194.505±121.56 371.791±340.21 218.053±174.80 154.159±116.66 188.374±156.78 188.600±123.24 309.037±169.02 489.141±91.18 253.512±18.92
ENST00000561569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562336 N/A N/A N/A 27.970±0.00 4.886±0.00 N/A 17.716±0.00 13.174±0.00 N/A N/A 28.923±0.00 4.891±0.00 N/A N/A
ENST00000562929 N/A N/A N/A N/A N/A N/A N/A N/A 22.523±0.00 N/A N/A 195.707±0.00 196.868±61.34 107.014±0.00
ENST00000563774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566405 73.303±0.00 N/A 14.211±0.00 156.677±0.00 53.598±42.80 N/A 19.493±0.00 N/A N/A N/A N/A 13.146±0.00 N/A N/A
ENST00000566617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570123 N/A N/A N/A N/A N/A N/A 22.384±0.00 N/A N/A N/A 45.517±0.00 12.235±0.00 N/A N/A
ENSG00000131148 ENST00000253457 N/A N/A N/A N/A 2.250±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131149 ENST00000253458 10.483±0.00 3.512±0.00 N/A 1.091±0.00 13.681±0.00 5.329±0.00 3.664±0.00 2.317±0.10 0.578±0.00 1.767±0.09 3.617±1.31 8.738±8.10 2.555±0.30 2.801±0.00
ENST00000393243 2.781±0.00 2.152±0.00 N/A 0.639±0.00 2.848±1.96 N/A N/A 2.000±0.00 2.013±0.00 2.637±0.00 5.408±0.00 8.184±0.00 4.522±2.73 10.266±0.00
ENST00000405402 N/A N/A N/A N/A 1.569±0.00 1.407±0.00 N/A N/A N/A 3.680±0.00 1.414±0.00 4.350±0.00 7.756±1.03 N/A
ENST00000411612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412692 N/A N/A N/A 1.973±0.00 N/A 1.166±0.00 1.113±0.83 1.921±0.00 0.753±0.00 1.990±0.00 3.549±0.00 3.356±0.68 10.462±0.00 7.720±0.00
ENST00000438180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.533±0.00 13.208±0.00 12.062±0.00
ENST00000469381 N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.00 N/A N/A 0.743±0.00 N/A N/A
ENST00000471070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131153 ENST00000253462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.251±0.00 N/A 5.915±0.00
ENST00000595355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154102 ENST00000284245 N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A N/A 0.135±0.00 N/A 0.958±0.02 2.515±1.09 N/A
ENST00000602583 N/A 1.684±0.00 N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.416±0.03 N/A 0.277±0.00
ENST00000602675 N/A N/A N/A N/A 0.396±0.00 0.141±0.00 N/A N/A N/A N/A N/A 1.547±0.59 8.312±3.25 0.351±0.00
ENST00000602719 N/A N/A N/A N/A N/A N/A 0.048±0.00 0.393±0.00 0.121±0.04 0.112±0.00 N/A 0.048±0.00 N/A N/A
ENST00000602758 N/A 0.711±0.00 N/A 0.620±0.49 N/A 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A 0.184±0.03
ENST00000602766 1.073±0.00 4.408±0.00 N/A 1.363±0.00 3.089±0.00 0.118±0.00 0.383±0.00 0.226±0.00 N/A 0.712±0.00 0.041±0.00 1.870±2.55 2.327±1.33 1.003±0.71
ENST00000602914 0.666±0.00 1.879±0.00 N/A N/A 0.573±0.00 0.194±0.11 N/A N/A N/A 0.268±0.00 N/A 1.463±0.00 N/A 0.388±0.00
ENSG00000214259 ENST00000484096 0.080±0.00 N/A N/A 0.031±0.00 0.030±0.00 0.055±0.00 N/A N/A N/A 0.058±0.00 0.176±0.00 0.037±0.00 N/A 0.050±0.00
ENSG00000252311 ENST00000516502 N/A 0.954±0.00 N/A 0.609±0.00 0.195±0.00 0.352±0.00 0.164±0.00 N/A N/A N/A N/A 1.200±0.67 N/A 1.027±0.00
ENSG00000260417 ENST00000567093 0.054±0.00 0.110±0.00 0.174±0.00 0.034±0.00 0.272±0.22 0.189±0.15 0.097±0.06 0.209±0.20 0.049±0.00 0.174±0.13 0.016±0.00 0.175±0.25 0.038±0.00 0.077±0.01
ENSG00000261567 ENST00000568080 N/A 0.744±0.00 1.127±0.00 N/A N/A 0.630±0.00 0.752±0.00 1.101±0.00 0.361±0.00 N/A 4.322±0.00 11.792±11.02 0.509±0.21 N/A
ENSG00000263968 ENST00000577658 0.491±0.00 0.444±0.00 N/A 0.170±0.00 2.597±2.13 1.395±1.32 0.072±0.00 0.467±0.00 2.423±2.29 1.016±0.72 N/A 0.448±0.24 0.429±0.18 0.714±0.02
ENSG00000266307 ENST00000583199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.884±0.00
ENSG00000269898 ENST00000602789 0.547±0.00 1.100±0.00 N/A 0.560±0.00 0.798±0.31 0.397±0.00 0.715±0.00 1.389±0.00 0.262±0.00 2.735±0.00 0.535±0.00 0.399±0.00 N/A 1.037±0.00
ENSG00000270124 ENST00000602862 N/A N/A 0.393±0.00 N/A 0.079±0.00 0.035±0.00 0.067±0.00 N/A N/A 0.574±0.00 N/A 0.411±0.32 0.114±0.00 N/A
ENSG00000270159 ENST00000602617 N/A 0.266±0.00 N/A N/A 0.170±0.00 N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A 4.097±0.36
ENSG00000270184 ENST00000602706 0.414±0.00 0.348±0.00 0.170±0.00 0.315±0.00 0.350±0.12 0.383±0.00 0.133±0.00 0.531±0.24 0.405±0.00 0.159±0.00 N/A 0.336±0.22 0.081±0.00 0.191±0.00
ENSG00000275393 ENST00000614011 N/A 1.240±0.00 N/A 0.109±0.00 0.203±0.17 N/A N/A N/A N/A 0.115±0.00 N/A 0.203±0.14 0.452±0.02 0.080±0.02
ENSG00000278716 ENST00000620845 N/A N/A 0.071±0.00 N/A 0.575±0.52 0.145±0.03 0.388±0.31 0.269±0.00 0.692±0.00 0.412±0.00 1.159±0.00 0.575±0.07 0.135±0.00 0.237±0.09
ENSG00000279907 ENST00000624587 0.071±0.00 0.159±0.00 N/A 0.070±0.00 0.124±0.08 0.040±0.00 0.041±0.00 0.053±0.00 0.024±0.00 0.143±0.00 N/A 0.032±0.01 N/A 0.079±0.00

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