C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131375 CAPN7 9606 + 3:15206152-15252918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253693 CAPN7-001 15206243-15252918 protein_coding
  ENST00000415565 CAPN7-006 15227950-15240595 protein_coding
  ENST00000418994 CAPN7-004 15206152-15217529 nonsense_mediated_decay
  ENST00000443567 CAPN7-007 15240509-15251246 nonsense_mediated_decay
  ENST00000457023 CAPN7-005 15206221-15221031 nonsense_mediated_decay
  ENST00000463417 CAPN7-003 15245887-15252302 retained_intron
  ENST00000472400 CAPN7-008 15247237-15251302 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253693ENST00000463417
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253693 4.215±0.00 3.408±0.00 2.428±0.00 1.474±0.65 3.093±1.46 2.629±1.37 2.827±1.83 2.469±0.41 3.029±0.16 3.417±0.04 2.555±1.61 2.771±1.78 3.253±0.13 5.438±1.98
ENST00000463417 2.758±0.00 2.011±0.00 N/A 0.939±0.05 1.886±0.00 1.610±0.00 N/A N/A N/A N/A 1.426±0.00 5.151±0.00 4.018±2.87 6.276±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EF CIL_0002EF_0002 CGP 3:15206152-15341368

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004198 IBA:IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0010634 IDA positive regulation of epithelial cell migration
GO:0070062 IDA extracellular vesicular exosome
GO:0090541 IPI MIT domain binding
GO:0097264 IDA self proteolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076931 capn7 calpain 7 protein_coding Danio_rerio
ENSMUSG00000021893 Capn7 calpain 7 protein_coding Mus_musculus

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