C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021893 Capn7 10090 + 14:31336638-31371986 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022451 Capn7-001 31336638-31371984 protein_coding
  ENSMUST00000143472 Capn7-003 31336675-31371986 nonsense_mediated_decay
  ENSMUST00000152182 Capn7-002 31336707-31371984 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022451ENSMUST00000143472ENSMUST00000152182
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022451 10.103±1.36 15.300±8.30 14.079±0.80 19.547±9.15 10.493±3.24 9.402±1.60 9.628±0.63 10.028±0.89 8.884±3.07 10.569±0.78 10.307±1.29 11.631±3.74 9.018±1.87 3.293±1.05
ENSMUST00000143472 N/A N/A N/A 2.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.489±0.09 1.000±0.00
ENSMUST00000152182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.921±0.15 1.167±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_0002EF CIL_0002EF_0003 CGP 14:31336638-31436078

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0006508 IBA proteolysis
GO:0010634 IEA positive regulation of epithelial cell migration
GO:0070062 IEA extracellular vesicular exosome
GO:0090541 IEA MIT domain binding
GO:0097264 IEA self proteolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076931 capn7 calpain 7 protein_coding Danio_rerio
ENSG00000131375 CAPN7 calpain 7 protein_coding Homo_sapiens

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